[(2S,3R,4S,5S)-3-[(2S,3R,4S,5R,6S)-5-[(2S,3R,4S,5R)-4-acetyloxy-3,5-dihydroxyoxan-2-yl]oxy-3,4-dihydroxy-6-methyloxan-2-yl]oxy-4,5-dihydroxyoxan-2-yl] (4aR,5R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-5-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-10-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate

Details

Top
Internal ID 24742112-29bf-4841-9e7f-3163a5c931c6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2S,3R,4S,5S)-3-[(2S,3R,4S,5R,6S)-5-[(2S,3R,4S,5R)-4-acetyloxy-3,5-dihydroxyoxan-2-yl]oxy-3,4-dihydroxy-6-methyloxan-2-yl]oxy-4,5-dihydroxyoxan-2-yl] (4aR,5R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-5-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-10-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(COC2OC(=O)C34CCC(CC3C5=CCC6C7(CCC(C(C7CCC6(C5(CC4O)C)C)(C)C)OC8C(C(C(C(O8)COC9C(C(C(CO9)O)O)O)O)O)O)C)(C)C)O)O)O)O)OC1C(C(C(CO1)O)OC(=O)C)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@H](CO[C@H]2OC(=O)[C@]34CCC(C[C@H]3C5=CC[C@@H]6[C@]7(CC[C@@H](C([C@@H]7CC[C@]6([C@@]5(C[C@H]4O)C)C)(C)C)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO[C@H]9[C@@H]([C@H]([C@H](CO9)O)O)O)O)O)O)C)(C)C)O)O)O)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)OC(=O)C)O
InChI InChI=1S/C59H94O26/c1-24-45(83-49-44(73)46(80-25(2)60)30(63)22-76-49)40(69)43(72)50(79-24)84-47-37(66)29(62)21-77-52(47)85-53(74)59-17-16-54(3,4)18-27(59)26-10-11-33-56(7)14-13-35(55(5,6)32(56)12-15-57(33,8)58(26,9)19-34(59)64)82-51-42(71)39(68)38(67)31(81-51)23-78-48-41(70)36(65)28(61)20-75-48/h10,24,27-52,61-73H,11-23H2,1-9H3/t24-,27-,28-,29-,30+,31+,32-,33+,34+,35-,36-,37-,38+,39-,40-,41+,42+,43+,44+,45-,46-,47+,48-,49-,50-,51-,52-,56-,57+,58+,59+/m0/s1
InChI Key JQOBEPNUCZWJMI-SNDQWUICSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C59H94O26
Molecular Weight 1219.40 g/mol
Exact Mass 1218.60333310 g/mol
Topological Polar Surface Area (TPSA) 399.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -1.72
H-Bond Acceptor 26
H-Bond Donor 13
Rotatable Bonds 12

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(2S,3R,4S,5S)-3-[(2S,3R,4S,5R,6S)-5-[(2S,3R,4S,5R)-4-acetyloxy-3,5-dihydroxyoxan-2-yl]oxy-3,4-dihydroxy-6-methyloxan-2-yl]oxy-4,5-dihydroxyoxan-2-yl] (4aR,5R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-5-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-10-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7979 79.79%
Caco-2 - 0.8725 87.25%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.8771 87.71%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior - 0.4801 48.01%
OATP1B3 inhibitior - 0.3399 33.99%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5526 55.26%
BSEP inhibitior + 0.9240 92.40%
P-glycoprotein inhibitior + 0.7452 74.52%
P-glycoprotein substrate + 0.5747 57.47%
CYP3A4 substrate + 0.7492 74.92%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8780 87.80%
CYP3A4 inhibition - 0.8893 88.93%
CYP2C9 inhibition - 0.8700 87.00%
CYP2C19 inhibition - 0.9168 91.68%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9103 91.03%
CYP2C8 inhibition + 0.7552 75.52%
CYP inhibitory promiscuity - 0.9729 97.29%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6031 60.31%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.8988 89.88%
Skin irritation - 0.5756 57.56%
Skin corrosion - 0.9428 94.28%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7530 75.30%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.8000 80.00%
skin sensitisation - 0.8881 88.81%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.8879 88.79%
Acute Oral Toxicity (c) III 0.7259 72.59%
Estrogen receptor binding + 0.7534 75.34%
Androgen receptor binding + 0.7395 73.95%
Thyroid receptor binding + 0.5997 59.97%
Glucocorticoid receptor binding + 0.7807 78.07%
Aromatase binding + 0.6795 67.95%
PPAR gamma + 0.8273 82.73%
Honey bee toxicity - 0.6510 65.10%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5795 57.95%
Fish aquatic toxicity + 0.9769 97.69%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.51% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.79% 96.09%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 93.29% 95.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.75% 86.33%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 91.29% 96.77%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.92% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.96% 97.25%
CHEMBL1937 Q92769 Histone deacetylase 2 88.89% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.65% 89.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 88.42% 97.36%
CHEMBL2581 P07339 Cathepsin D 87.79% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 87.01% 95.93%
CHEMBL5028 O14672 ADAM10 85.90% 97.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.65% 94.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.53% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.69% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.58% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 81.93% 92.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.72% 95.89%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 80.55% 89.44%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Stachys riederi

Cross-Links

Top
PubChem 10102857
LOTUS LTS0114204
wikiData Q105133564