1-hydroxy-3,6,7-trimethoxy-2-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-4-[(2R,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]xanthen-9-one

Details

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Internal ID f65b133f-0cc1-44d2-a904-9d786ae17d6c
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1-hydroxy-3,6,7-trimethoxy-2-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-4-[(2R,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]xanthen-9-one
SMILES (Canonical) COC1=C(C=C2C(=C1)C(=O)C3=C(C(=C(C(=C3O2)C4C(C(C(C(O4)CO)O)O)O)OC)C5C(C(C(C(O5)CO)O)O)O)O)OC
SMILES (Isomeric) COC1=C(C=C2C(=C1)C(=O)C3=C(C(=C(C(=C3O2)[C@@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)OC)[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)OC
InChI InChI=1S/C28H34O16/c1-39-10-4-8-9(5-11(10)40-2)42-26-14(17(8)31)20(34)15(27-23(37)21(35)18(32)12(6-29)43-27)25(41-3)16(26)28-24(38)22(36)19(33)13(7-30)44-28/h4-5,12-13,18-19,21-24,27-30,32-38H,6-7H2,1-3H3/t12-,13-,18-,19-,21+,22+,23-,24-,27+,28-/m1/s1
InChI Key GBUIUNLMEALJPT-RZIHRXSMSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H34O16
Molecular Weight 626.60 g/mol
Exact Mass 626.18468499 g/mol
Topological Polar Surface Area (TPSA) 255.00 Ų
XlogP -1.80
Atomic LogP (AlogP) -2.29
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 1-hydroxy-3,6,7-trimethoxy-2-[(2S,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-4-[(2R,3R,4R,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]xanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6015 60.15%
Caco-2 - 0.8571 85.71%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.5936 59.36%
OATP2B1 inhibitior - 0.8532 85.32%
OATP1B1 inhibitior + 0.7973 79.73%
OATP1B3 inhibitior + 0.9740 97.40%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.5864 58.64%
P-glycoprotein inhibitior - 0.4767 47.67%
P-glycoprotein substrate - 0.6109 61.09%
CYP3A4 substrate + 0.5894 58.94%
CYP2C9 substrate - 0.8087 80.87%
CYP2D6 substrate - 0.8299 82.99%
CYP3A4 inhibition - 0.8976 89.76%
CYP2C9 inhibition - 0.9048 90.48%
CYP2C19 inhibition - 0.8686 86.86%
CYP2D6 inhibition - 0.9467 94.67%
CYP1A2 inhibition - 0.8755 87.55%
CYP2C8 inhibition - 0.6055 60.55%
CYP inhibitory promiscuity - 0.6867 68.67%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7011 70.11%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9097 90.97%
Skin irritation - 0.8428 84.28%
Skin corrosion - 0.9603 96.03%
Ames mutagenesis + 0.5445 54.45%
Human Ether-a-go-go-Related Gene inhibition - 0.4180 41.80%
Micronuclear + 0.6059 60.59%
Hepatotoxicity - 0.5375 53.75%
skin sensitisation - 0.9183 91.83%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.8803 88.03%
Acute Oral Toxicity (c) III 0.6944 69.44%
Estrogen receptor binding + 0.7586 75.86%
Androgen receptor binding + 0.6578 65.78%
Thyroid receptor binding - 0.5341 53.41%
Glucocorticoid receptor binding + 0.6283 62.83%
Aromatase binding + 0.6170 61.70%
PPAR gamma + 0.6254 62.54%
Honey bee toxicity - 0.8077 80.77%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6649 66.49%
Fish aquatic toxicity - 0.4070 40.70%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.47% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.56% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.76% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.69% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.79% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.73% 99.17%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 88.49% 96.21%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.80% 86.33%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.25% 99.23%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.85% 96.09%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.79% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 84.37% 94.73%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.02% 92.94%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.56% 94.45%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 80.09% 94.03%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asplenium adiantum-nigrum

Cross-Links

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PubChem 162913960
LOTUS LTS0242536
wikiData Q105006091