(3R,4R,5R)-5-[(3S,4S,5S,6R,7R)-3,7-bis(3,4-dihydroxyphenyl)-6,11-dihydroxy-2,8-dioxatricyclo[7.3.1.05,13]trideca-1(13),9,11-triene-4-carbonyl]oxy-3,4-dihydroxycyclohexene-1-carboxylic acid

Details

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Internal ID 5f67c846-0c57-4224-aa52-1672351a5a09
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavans > Catechins
IUPAC Name (3R,4R,5R)-5-[(3S,4S,5S,6R,7R)-3,7-bis(3,4-dihydroxyphenyl)-6,11-dihydroxy-2,8-dioxatricyclo[7.3.1.05,13]trideca-1(13),9,11-triene-4-carbonyl]oxy-3,4-dihydroxycyclohexene-1-carboxylic acid
SMILES (Canonical) C1C(C(C(C=C1C(=O)O)O)O)OC(=O)C2C3C(C(OC4=CC(=CC(=C34)OC2C5=CC(=C(C=C5)O)O)O)C6=CC(=C(C=C6)O)O)O
SMILES (Isomeric) C1[C@H]([C@@H]([C@@H](C=C1C(=O)O)O)O)OC(=O)[C@H]2[C@@H]3[C@H]([C@H](OC4=CC(=CC(=C34)O[C@@H]2C5=CC(=C(C=C5)O)O)O)C6=CC(=C(C=C6)O)O)O
InChI InChI=1S/C31H28O14/c32-14-9-20-23-21(10-14)44-29(12-2-4-16(34)18(36)6-12)27(39)24(23)25(28(43-20)11-1-3-15(33)17(35)5-11)31(42)45-22-8-13(30(40)41)7-19(37)26(22)38/h1-7,9-10,19,22,24-29,32-39H,8H2,(H,40,41)/t19-,22-,24-,25+,26-,27-,28-,29-/m1/s1
InChI Key PGUJCQJXEAOJSS-PRXWGZOISA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C31H28O14
Molecular Weight 624.50 g/mol
Exact Mass 624.14790556 g/mol
Topological Polar Surface Area (TPSA) 244.00 Ų
XlogP 0.70
Atomic LogP (AlogP) 1.59
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3R,4R,5R)-5-[(3S,4S,5S,6R,7R)-3,7-bis(3,4-dihydroxyphenyl)-6,11-dihydroxy-2,8-dioxatricyclo[7.3.1.05,13]trideca-1(13),9,11-triene-4-carbonyl]oxy-3,4-dihydroxycyclohexene-1-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8850 88.50%
Caco-2 - 0.9287 92.87%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7378 73.78%
OATP2B1 inhibitior - 0.8351 83.51%
OATP1B1 inhibitior + 0.9029 90.29%
OATP1B3 inhibitior + 0.9754 97.54%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9326 93.26%
P-glycoprotein inhibitior + 0.6470 64.70%
P-glycoprotein substrate - 0.7793 77.93%
CYP3A4 substrate + 0.6037 60.37%
CYP2C9 substrate - 0.7935 79.35%
CYP2D6 substrate - 0.8485 84.85%
CYP3A4 inhibition - 0.9066 90.66%
CYP2C9 inhibition + 0.8192 81.92%
CYP2C19 inhibition + 0.5646 56.46%
CYP2D6 inhibition - 0.9011 90.11%
CYP1A2 inhibition - 0.7924 79.24%
CYP2C8 inhibition + 0.6342 63.42%
CYP inhibitory promiscuity - 0.7387 73.87%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5561 55.61%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.8747 87.47%
Skin irritation - 0.7202 72.02%
Skin corrosion - 0.9466 94.66%
Ames mutagenesis + 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7882 78.82%
Micronuclear + 0.8259 82.59%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.8003 80.03%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity + 0.7836 78.36%
Acute Oral Toxicity (c) I 0.3272 32.72%
Estrogen receptor binding + 0.7834 78.34%
Androgen receptor binding + 0.7191 71.91%
Thyroid receptor binding + 0.5603 56.03%
Glucocorticoid receptor binding - 0.5000 50.00%
Aromatase binding - 0.6664 66.64%
PPAR gamma + 0.6288 62.88%
Honey bee toxicity - 0.6836 68.36%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9844 98.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.37% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 93.75% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.66% 96.09%
CHEMBL3194 P02766 Transthyretin 92.87% 90.71%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.87% 99.15%
CHEMBL1951 P21397 Monoamine oxidase A 89.09% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.07% 95.56%
CHEMBL2581 P07339 Cathepsin D 87.73% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.60% 97.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.29% 99.23%
CHEMBL2535 P11166 Glucose transporter 84.92% 98.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.77% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.55% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.38% 89.00%
CHEMBL245 P20309 Muscarinic acetylcholine receptor M3 81.64% 97.53%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 46832203
LOTUS LTS0238132
wikiData Q105208703