[(2S,3R,4S,5R,6S)-6-[(2S,3R,4S,5S)-2-[(1S,2R,3'S,4S,4'S,5'S,6S,7S,8R,9S,12R,13R,14R,16R)-3',16-dihydroxy-5',7,9,13-tetramethyl-4'-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-5-hydroxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-4,5-dihydroxy-2-methyloxan-3-yl] acetate

Details

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Internal ID 31bef478-36e7-492c-a6c4-0ae65c4987c5
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(2S,3R,4S,5R,6S)-6-[(2S,3R,4S,5S)-2-[(1S,2R,3'S,4S,4'S,5'S,6S,7S,8R,9S,12R,13R,14R,16R)-3',16-dihydroxy-5',7,9,13-tetramethyl-4'-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-5-hydroxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-4,5-dihydroxy-2-methyloxan-3-yl] acetate
SMILES (Canonical) CC1COC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(C(CC(C6)O)OC7C(C(C(CO7)O)OC8C(C(C(CO8)O)O)O)OC9C(C(C(C(O9)C)OC(=O)C)O)O)C)C)C)C(C1OC1C(C(C(C(O1)C)O)O)O)O
SMILES (Isomeric) C[C@H]1CO[C@]2([C@H]([C@H]3[C@@H](O2)C[C@H]4[C@@]3(CC[C@@H]5[C@H]4CC=C6[C@@]5([C@@H](C[C@@H](C6)O)O[C@H]7[C@@H]([C@H]([C@H](CO7)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O[C@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)OC(=O)C)O)O)C)C)C)[C@H]([C@H]1O[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)C)O)O)O)O
InChI InChI=1S/C51H80O23/c1-18-15-66-51(44(63)40(18)71-46-38(61)35(58)33(56)20(3)67-46)19(2)32-30(74-51)14-27-25-9-8-23-12-24(53)13-31(50(23,7)26(25)10-11-49(27,32)6)70-48-43(73-47-39(62)36(59)41(21(4)68-47)69-22(5)52)42(29(55)17-65-48)72-45-37(60)34(57)28(54)16-64-45/h8,18-21,24-48,53-63H,9-17H2,1-7H3/t18-,19-,20+,21-,24+,25+,26+,27+,28+,29-,30-,31+,32-,33-,34-,35-,36-,37+,38+,39+,40-,41-,42-,43+,44-,45-,46-,47-,48-,49-,50-,51-/m0/s1
InChI Key NYQZCRPFFFQFKL-QPGXXFFASA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C51H80O23
Molecular Weight 1061.20 g/mol
Exact Mass 1060.50903879 g/mol
Topological Polar Surface Area (TPSA) 341.00 Ų
XlogP -1.90
Atomic LogP (AlogP) -2.17
H-Bond Acceptor 23
H-Bond Donor 11
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2S,3R,4S,5R,6S)-6-[(2S,3R,4S,5S)-2-[(1S,2R,3'S,4S,4'S,5'S,6S,7S,8R,9S,12R,13R,14R,16R)-3',16-dihydroxy-5',7,9,13-tetramethyl-4'-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-5-hydroxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-4,5-dihydroxy-2-methyloxan-3-yl] acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8860 88.60%
Caco-2 - 0.8842 88.42%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.8262 82.62%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8523 85.23%
OATP1B3 inhibitior + 0.9256 92.56%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.8411 84.11%
P-glycoprotein inhibitior + 0.7471 74.71%
P-glycoprotein substrate + 0.7091 70.91%
CYP3A4 substrate + 0.7673 76.73%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8767 87.67%
CYP3A4 inhibition - 0.9535 95.35%
CYP2C9 inhibition - 0.9285 92.85%
CYP2C19 inhibition - 0.9372 93.72%
CYP2D6 inhibition - 0.9326 93.26%
CYP1A2 inhibition - 0.9123 91.23%
CYP2C8 inhibition + 0.7761 77.61%
CYP inhibitory promiscuity - 0.9617 96.17%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.4958 49.58%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9055 90.55%
Skin irritation + 0.5296 52.96%
Skin corrosion - 0.9372 93.72%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8008 80.08%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.6695 66.95%
skin sensitisation - 0.9031 90.31%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.7950 79.50%
Acute Oral Toxicity (c) I 0.4553 45.53%
Estrogen receptor binding + 0.8316 83.16%
Androgen receptor binding + 0.7392 73.92%
Thyroid receptor binding - 0.4939 49.39%
Glucocorticoid receptor binding + 0.7374 73.74%
Aromatase binding + 0.6325 63.25%
PPAR gamma + 0.8066 80.66%
Honey bee toxicity - 0.5581 55.81%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.6145 61.45%
Fish aquatic toxicity + 0.9652 96.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.21% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.53% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.51% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 92.90% 95.93%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.86% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 92.26% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.42% 100.00%
CHEMBL221 P23219 Cyclooxygenase-1 90.32% 90.17%
CHEMBL2581 P07339 Cathepsin D 89.64% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.21% 97.25%
CHEMBL1914 P06276 Butyrylcholinesterase 88.78% 95.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.19% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 87.78% 92.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.26% 94.00%
CHEMBL2179 P04062 Beta-glucocerebrosidase 86.44% 85.31%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.68% 92.94%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.39% 92.62%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.25% 95.56%
CHEMBL1871 P10275 Androgen Receptor 83.08% 96.43%
CHEMBL5028 O14672 ADAM10 82.71% 97.50%
CHEMBL3401 O75469 Pregnane X receptor 81.19% 94.73%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.17% 94.45%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.97% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ophiopogon japonicus

Cross-Links

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PubChem 162988749
LOTUS LTS0155778
wikiData Q105187636