Dynemicin P

Details

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Internal ID 557f31d9-5fcf-4afe-989e-5baf7c944636
Taxonomy Benzenoids > Anthracenes > Anthraquinones
IUPAC Name 2,3,6,20,23,27-hexahydroxy-4-methyl-15-azaheptacyclo[14.12.0.02,7.03,14.08,13.017,26.019,24]octacosa-1(28),8,10,12,16,19,21,23,26-nonaene-5,18,25-trione
SMILES (Canonical) CC1C(=O)C(C2C3=CC=CC=C3C4C1(C2(C5=CC(=C6C(=C5N4)C(=O)C7=C(C=CC(=C7C6=O)O)O)O)O)O)O
SMILES (Isomeric) CC1C(=O)C(C2C3=CC=CC=C3C4C1(C2(C5=CC(=C6C(=C5N4)C(=O)C7=C(C=CC(=C7C6=O)O)O)O)O)O)O
InChI InChI=1S/C28H21NO9/c1-9-22(33)25(36)20-10-4-2-3-5-11(10)26-27(9,37)28(20,38)12-8-15(32)18-19(21(12)29-26)24(35)17-14(31)7-6-13(30)16(17)23(18)34/h2-9,20,25-26,29-32,36-38H,1H3
InChI Key SMIPWYWDEUZLFV-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C28H21NO9
Molecular Weight 515.50 g/mol
Exact Mass 515.12163125 g/mol
Topological Polar Surface Area (TPSA) 185.00 Ų
XlogP 1.70
Atomic LogP (AlogP) 1.34
H-Bond Acceptor 10
H-Bond Donor 7
Rotatable Bonds 0

Synonyms

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138370-13-5
2,3,6,20,23,27-hexahydroxy-4-methyl-15-azaheptacyclo[14.12.0.02,7.03,14.08,13.017,26.019,24]octacosa-1(28),8,10,12,16,19,21,23,26-nonaene-5,18,25-trione
DTXSID80930078
1,4,6,8,17,20-hexahydroxy-18-methyl-8,9,14,15-tetrahydro-8,14,9-(butane[1,1,4]triyl)anthra[1,2-b]benzo[f]azocine-5,16,19-trione
9,8,14-(1)Butanyl(4)ylideneanthra(1,2-b)benz(f)azocine-5,16,19-trione, 8,9,14,15-tetrahydro-1,4,6,8,17,20-hexahydroxy-18-methyl-, (8R-(8alpha,9beta,14beta,17S*,18R*))-

2D Structure

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2D Structure of Dynemicin P

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9014 90.14%
Caco-2 - 0.8560 85.60%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.5220 52.20%
OATP2B1 inhibitior + 0.5836 58.36%
OATP1B1 inhibitior + 0.8636 86.36%
OATP1B3 inhibitior + 0.9693 96.93%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.8285 82.85%
P-glycoprotein inhibitior - 0.6569 65.69%
P-glycoprotein substrate - 0.6264 62.64%
CYP3A4 substrate + 0.6458 64.58%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8133 81.33%
CYP3A4 inhibition - 0.8644 86.44%
CYP2C9 inhibition - 0.7861 78.61%
CYP2C19 inhibition - 0.7402 74.02%
CYP2D6 inhibition - 0.8872 88.72%
CYP1A2 inhibition - 0.5000 50.00%
CYP2C8 inhibition + 0.4628 46.28%
CYP inhibitory promiscuity - 0.7766 77.66%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6648 66.48%
Eye corrosion - 0.9958 99.58%
Eye irritation - 0.9223 92.23%
Skin irritation - 0.8066 80.66%
Skin corrosion - 0.9286 92.86%
Ames mutagenesis + 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4649 46.49%
Micronuclear + 0.8100 81.00%
Hepatotoxicity + 0.6000 60.00%
skin sensitisation - 0.8529 85.29%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity + 0.6544 65.44%
Acute Oral Toxicity (c) III 0.6536 65.36%
Estrogen receptor binding + 0.6142 61.42%
Androgen receptor binding + 0.8165 81.65%
Thyroid receptor binding - 0.5173 51.73%
Glucocorticoid receptor binding + 0.6778 67.78%
Aromatase binding - 0.5328 53.28%
PPAR gamma + 0.7458 74.58%
Honey bee toxicity - 0.8300 83.00%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.6854 68.54%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.45% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.29% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.73% 95.56%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 90.00% 93.03%
CHEMBL1937 Q92769 Histone deacetylase 2 87.66% 94.75%
CHEMBL4208 P20618 Proteasome component C5 86.55% 90.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.14% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.67% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.60% 99.15%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.81% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 82.17% 94.73%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 81.96% 93.40%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.83% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 126390
LOTUS LTS0025542
wikiData Q82905284