Duocarmycin Sa

Details

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Internal ID 95aae8e1-0be0-4023-987f-b8a383bde9b5
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Indolecarboxylic acids and derivatives > Indolecarboxamides and derivatives
IUPAC Name methyl (1R,12S)-7-oxo-10-(5,6,7-trimethoxy-1H-indole-2-carbonyl)-5,10-diazatetracyclo[7.4.0.01,12.02,6]trideca-2(6),3,8-triene-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H23N3O7/c1-32-17-6-11-5-14(26-19(11)22(34-3)21(17)33-2)23(30)28-10-12-9-25(12)13-7-15(24(31)35-4)27-20(13)16(29)8-18(25)28/h5-8,12,26-27H,9-10H2,1-4H3/t12-,25-/m1/s1
InChI Key VQNATVDKACXKTF-XELLLNAOSA-N
Popularity 107 references in papers

Physical and Chemical Properties

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Molecular Formula C25H23N3O7
Molecular Weight 477.50 g/mol
Exact Mass 477.15360008 g/mol
Topological Polar Surface Area (TPSA) 123.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.80
H-Bond Acceptor 7
H-Bond Donor 2
Rotatable Bonds 5

Synonyms

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130288-24-3
(+)-duocarmycin SA
methyl (1R,12S)-7-oxo-10-(5,6,7-trimethoxy-1H-indole-2-carbonyl)-5,10-diazatetracyclo[7.4.0.01,12.02,6]trideca-2(6),3,8-triene-4-carboxylate
Antibiotic DC113
duocarmycinsa
SCHEMBL61916
CHEMBL308086
DTXSID30926663
EX-A7932
AKOS032946598
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Duocarmycin Sa

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8680 86.80%
Caco-2 - 0.7020 70.20%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7925 79.25%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8826 88.26%
OATP1B3 inhibitior + 0.9245 92.45%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9884 98.84%
P-glycoprotein inhibitior + 0.8026 80.26%
P-glycoprotein substrate + 0.6377 63.77%
CYP3A4 substrate + 0.6834 68.34%
CYP2C9 substrate - 0.5962 59.62%
CYP2D6 substrate - 0.8368 83.68%
CYP3A4 inhibition + 0.5513 55.13%
CYP2C9 inhibition - 0.5800 58.00%
CYP2C19 inhibition - 0.5987 59.87%
CYP2D6 inhibition - 0.8683 86.83%
CYP1A2 inhibition - 0.5533 55.33%
CYP2C8 inhibition + 0.6711 67.11%
CYP inhibitory promiscuity + 0.7432 74.32%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Non-required 0.4538 45.38%
Eye corrosion - 0.9864 98.64%
Eye irritation - 0.9315 93.15%
Skin irritation - 0.7954 79.54%
Skin corrosion - 0.9397 93.97%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6679 66.79%
Micronuclear + 0.7300 73.00%
Hepatotoxicity + 0.5552 55.52%
skin sensitisation - 0.8776 87.76%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.8475 84.75%
Acute Oral Toxicity (c) III 0.5658 56.58%
Estrogen receptor binding + 0.7589 75.89%
Androgen receptor binding + 0.6494 64.94%
Thyroid receptor binding + 0.5971 59.71%
Glucocorticoid receptor binding + 0.7257 72.57%
Aromatase binding + 0.5971 59.71%
PPAR gamma + 0.6890 68.90%
Honey bee toxicity - 0.8485 84.85%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.9775 97.75%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 99.53% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.91% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.01% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.19% 94.45%
CHEMBL2535 P11166 Glucose transporter 91.33% 98.75%
CHEMBL2581 P07339 Cathepsin D 90.01% 98.95%
CHEMBL4302 P08183 P-glycoprotein 1 88.90% 92.98%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 88.84% 93.03%
CHEMBL340 P08684 Cytochrome P450 3A4 88.60% 91.19%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.45% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.86% 99.17%
CHEMBL213 P08588 Beta-1 adrenergic receptor 85.93% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.33% 99.23%
CHEMBL4208 P20618 Proteasome component C5 85.22% 90.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.44% 97.09%
CHEMBL4040 P28482 MAP kinase ERK2 84.25% 83.82%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.95% 95.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.79% 97.25%
CHEMBL3192 Q9BY41 Histone deacetylase 8 82.08% 93.99%
CHEMBL255 P29275 Adenosine A2b receptor 80.96% 98.59%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.69% 90.71%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.53% 93.40%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 115369
LOTUS LTS0275065
wikiData Q72470566