(2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-6-[(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S,20S)-20-hydroxy-5'-(hydroxymethyl)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 61e6d695-1d87-45e8-8608-3f700aed2135
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-6-[(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S,20S)-20-hydroxy-5'-(hydroxymethyl)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C46H74O18/c1-19-30-27(64-46(19)12-11-43(4,17-48)18-57-46)15-25-29-24(8-10-45(25,30)6)44(5)9-7-23(13-22(44)14-26(29)49)60-42-39(63-41-36(55)34(53)32(51)21(3)59-41)37(56)38(28(16-47)61-42)62-40-35(54)33(52)31(50)20(2)58-40/h14,19-21,23-42,47-56H,7-13,15-18H2,1-6H3/t19-,20-,21-,23-,24-,25-,26+,27-,28+,29+,30-,31-,32-,33+,34+,35+,36+,37-,38+,39+,40-,41-,42+,43+,44-,45-,46+/m0/s1
InChI Key UFEZBYVHQMNKBM-ZULHREFHSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C46H74O18
Molecular Weight 915.10 g/mol
Exact Mass 914.48751551 g/mol
Topological Polar Surface Area (TPSA) 276.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.42
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-4-hydroxy-6-[(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S,20S)-20-hydroxy-5'-(hydroxymethyl)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7196 71.96%
Caco-2 - 0.8894 88.94%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7739 77.39%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8545 85.45%
OATP1B3 inhibitior + 0.8663 86.63%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.8906 89.06%
P-glycoprotein inhibitior + 0.7367 73.67%
P-glycoprotein substrate + 0.5477 54.77%
CYP3A4 substrate + 0.7457 74.57%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8216 82.16%
CYP3A4 inhibition - 0.9460 94.60%
CYP2C9 inhibition - 0.9118 91.18%
CYP2C19 inhibition - 0.9113 91.13%
CYP2D6 inhibition - 0.9360 93.60%
CYP1A2 inhibition - 0.8848 88.48%
CYP2C8 inhibition + 0.7484 74.84%
CYP inhibitory promiscuity - 0.8774 87.74%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5291 52.91%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9110 91.10%
Skin irritation - 0.5662 56.62%
Skin corrosion - 0.9438 94.38%
Ames mutagenesis - 0.8024 80.24%
Human Ether-a-go-go-Related Gene inhibition + 0.7670 76.70%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9240 92.40%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.6813 68.13%
Acute Oral Toxicity (c) III 0.4459 44.59%
Estrogen receptor binding + 0.8569 85.69%
Androgen receptor binding + 0.7042 70.42%
Thyroid receptor binding - 0.5290 52.90%
Glucocorticoid receptor binding + 0.6245 62.45%
Aromatase binding + 0.6849 68.49%
PPAR gamma + 0.7765 77.65%
Honey bee toxicity - 0.5882 58.82%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9442 94.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.67% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.51% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 94.55% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.19% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 94.04% 95.89%
CHEMBL332 P03956 Matrix metalloproteinase-1 91.72% 94.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.54% 92.94%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.17% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.63% 89.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.65% 95.50%
CHEMBL3714130 P46095 G-protein coupled receptor 6 88.38% 97.36%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 88.04% 89.05%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.62% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.25% 86.33%
CHEMBL2581 P07339 Cathepsin D 85.37% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.84% 94.00%
CHEMBL325 Q13547 Histone deacetylase 1 84.54% 95.92%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.04% 100.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.57% 96.90%
CHEMBL233 P35372 Mu opioid receptor 82.16% 97.93%
CHEMBL237 P41145 Kappa opioid receptor 81.83% 98.10%
CHEMBL5028 O14672 ADAM10 80.90% 97.50%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 80.89% 92.86%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.75% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.73% 94.45%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 80.57% 98.99%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea septemloba

Cross-Links

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PubChem 101855150
NPASS NPC17607