dihydrodaphnodorin B

Details

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Internal ID 52adcebb-e547-4912-a3c1-247c067b5f46
Taxonomy Phenylpropanoids and polyketides > 2-arylbenzofuran flavonoids
IUPAC Name [(2R,3S)-3,5-dihydroxy-2,8-bis(4-hydroxyphenyl)-3,4,8,9-tetrahydro-2H-furo[2,3-h]chromen-9-yl]-(2,4,6-trihydroxyphenyl)methanone
SMILES (Canonical) C1C(C(OC2=C1C(=CC3=C2C(C(O3)C4=CC=C(C=C4)O)C(=O)C5=C(C=C(C=C5O)O)O)O)C6=CC=C(C=C6)O)O
SMILES (Isomeric) C1[C@@H]([C@H](OC2=C1C(=CC3=C2C(C(O3)C4=CC=C(C=C4)O)C(=O)C5=C(C=C(C=C5O)O)O)O)C6=CC=C(C=C6)O)O
InChI InChI=1S/C30H24O10/c31-15-5-1-13(2-6-15)28-22(37)11-18-19(34)12-23-25(30(18)40-28)26(29(39-23)14-3-7-16(32)8-4-14)27(38)24-20(35)9-17(33)10-21(24)36/h1-10,12,22,26,28-29,31-37H,11H2/t22-,26?,28+,29?/m0/s1
InChI Key YXPCHLHMGOFXRA-DHGPJANISA-N
Popularity 6 references in papers

Physical and Chemical Properties

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Molecular Formula C30H24O10
Molecular Weight 544.50 g/mol
Exact Mass 544.13694696 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP 3.80
Atomic LogP (AlogP) 4.06
H-Bond Acceptor 10
H-Bond Donor 7
Rotatable Bonds 4

Synonyms

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MLS002472883
SMR001396994
CHEMBL1532097
BDBM76247
cid_44144307
[(2R,3S)-2,8-bis(4-hydroxyphenyl)-3,5-bis(oxidanyl)-3,4,8,9-tetrahydro-2H-furo[2,3-h]chromen-9-yl]-[2,4,6-tris(oxidanyl)phenyl]methanone
[(2R,3S)-3,5-dihydroxy-2,8-bis(4-hydroxyphenyl)-3,4,8,9-tetrahydro-2H-furo[2,3-h][1]benzopyran-9-yl]-(2,4,6-trihydroxyphenyl)methanone
[(2R,3S)-3,5-dihydroxy-2,8-bis(4-hydroxyphenyl)-3,4,8,9-tetrahydro-2H-furo[2,3-h]chromen-9-yl]-(2,4,6-trihydroxyphenyl)methanone

2D Structure

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2D Structure of dihydrodaphnodorin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9740 97.40%
Caco-2 - 0.8779 87.79%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6794 67.94%
OATP2B1 inhibitior - 0.5601 56.01%
OATP1B1 inhibitior - 0.3244 32.44%
OATP1B3 inhibitior - 0.4619 46.19%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.8217 82.17%
P-glycoprotein inhibitior + 0.7443 74.43%
P-glycoprotein substrate - 0.7384 73.84%
CYP3A4 substrate + 0.6040 60.40%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7417 74.17%
CYP3A4 inhibition - 0.5102 51.02%
CYP2C9 inhibition - 0.5971 59.71%
CYP2C19 inhibition - 0.6782 67.82%
CYP2D6 inhibition - 0.8553 85.53%
CYP1A2 inhibition - 0.6777 67.77%
CYP2C8 inhibition + 0.6446 64.46%
CYP inhibitory promiscuity - 0.6460 64.60%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5237 52.37%
Eye corrosion - 0.9916 99.16%
Eye irritation - 0.7583 75.83%
Skin irritation - 0.6060 60.60%
Skin corrosion - 0.9497 94.97%
Ames mutagenesis + 0.5346 53.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7809 78.09%
Micronuclear + 0.8959 89.59%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.7796 77.96%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity + 0.6851 68.51%
Acute Oral Toxicity (c) III 0.3558 35.58%
Estrogen receptor binding + 0.7755 77.55%
Androgen receptor binding + 0.7877 78.77%
Thyroid receptor binding + 0.5926 59.26%
Glucocorticoid receptor binding + 0.6491 64.91%
Aromatase binding - 0.6291 62.91%
PPAR gamma + 0.6897 68.97%
Honey bee toxicity - 0.8206 82.06%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.6000 60.00%
Fish aquatic toxicity + 0.7756 77.56%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.43% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.23% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 94.24% 83.82%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.95% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.47% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.29% 94.45%
CHEMBL2581 P07339 Cathepsin D 89.06% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.86% 95.56%
CHEMBL3194 P02766 Transthyretin 84.77% 90.71%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.84% 99.23%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 83.12% 85.11%
CHEMBL2535 P11166 Glucose transporter 83.07% 98.75%
CHEMBL3401 O75469 Pregnane X receptor 81.88% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Stellera chamaejasme
Wikstroemia sikokiana

Cross-Links

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PubChem 44144307
LOTUS LTS0251655
wikiData Q104398880