Dichrysobactin

Details

Top
Internal ID 5e27f260-24b4-43c3-a261-2132ca5c006a
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Dipeptides
IUPAC Name (2S)-2-[[(2R)-6-amino-2-[(2,3-dihydroxybenzoyl)amino]hexanoyl]amino]-3-[(2S)-2-[[(2R)-6-amino-2-[(2,3-dihydroxybenzoyl)amino]hexanoyl]amino]-3-hydroxypropanoyl]oxypropanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C32H44N6O13/c33-13-3-1-9-19(35-27(44)17-7-5-11-23(40)25(17)42)29(46)37-21(15-39)32(50)51-16-22(31(48)49)38-30(47)20(10-2-4-14-34)36-28(45)18-8-6-12-24(41)26(18)43/h5-8,11-12,19-22,39-43H,1-4,9-10,13-16,33-34H2,(H,35,44)(H,36,45)(H,37,46)(H,38,47)(H,48,49)/t19-,20-,21+,22+/m1/s1
InChI Key NQNOYRJMWKVMTO-CZYKHXBRSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C32H44N6O13
Molecular Weight 720.70 g/mol
Exact Mass 720.29663548 g/mol
Topological Polar Surface Area (TPSA) 333.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -1.75
H-Bond Acceptor 14
H-Bond Donor 12
Rotatable Bonds 21

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of Dichrysobactin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6171 61.71%
Caco-2 - 0.8820 88.20%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.5194 51.94%
OATP2B1 inhibitior - 0.5735 57.35%
OATP1B1 inhibitior + 0.9231 92.31%
OATP1B3 inhibitior + 0.9350 93.50%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.6477 64.77%
P-glycoprotein inhibitior + 0.7312 73.12%
P-glycoprotein substrate + 0.5628 56.28%
CYP3A4 substrate + 0.5717 57.17%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8350 83.50%
CYP3A4 inhibition - 0.7512 75.12%
CYP2C9 inhibition - 0.8986 89.86%
CYP2C19 inhibition - 0.7340 73.40%
CYP2D6 inhibition - 0.8065 80.65%
CYP1A2 inhibition - 0.7296 72.96%
CYP2C8 inhibition - 0.7069 70.69%
CYP inhibitory promiscuity - 0.8973 89.73%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8100 81.00%
Carcinogenicity (trinary) Non-required 0.7367 73.67%
Eye corrosion - 0.9920 99.20%
Eye irritation - 0.9088 90.88%
Skin irritation - 0.7820 78.20%
Skin corrosion - 0.9433 94.33%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6509 65.09%
Micronuclear + 0.7600 76.00%
Hepatotoxicity - 0.6489 64.89%
skin sensitisation - 0.8975 89.75%
Respiratory toxicity + 0.6556 65.56%
Reproductive toxicity + 0.8595 85.95%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.6614 66.14%
Acute Oral Toxicity (c) III 0.7657 76.57%
Estrogen receptor binding + 0.7546 75.46%
Androgen receptor binding + 0.7775 77.75%
Thyroid receptor binding - 0.5080 50.80%
Glucocorticoid receptor binding - 0.5356 53.56%
Aromatase binding + 0.6202 62.02%
PPAR gamma + 0.7055 70.55%
Honey bee toxicity - 0.9156 91.56%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7050 70.50%
Fish aquatic toxicity + 0.8191 81.91%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3359 P21462 Formyl peptide receptor 1 96.13% 93.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.77% 91.11%
CHEMBL2581 P07339 Cathepsin D 94.79% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.59% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 94.12% 99.17%
CHEMBL1255126 O15151 Protein Mdm4 93.06% 90.20%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 92.88% 82.86%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.69% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.83% 94.45%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 91.49% 95.50%
CHEMBL221 P23219 Cyclooxygenase-1 90.58% 90.17%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 89.16% 100.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.45% 99.15%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.91% 96.00%
CHEMBL3891 P07384 Calpain 1 86.36% 93.04%
CHEMBL4227 P25090 Lipoxin A4 receptor 85.83% 100.00%
CHEMBL2095164 P49354 Geranylgeranyl transferase type I 84.34% 92.80%
CHEMBL3401 O75469 Pregnane X receptor 83.48% 94.73%
CHEMBL2514 O95665 Neurotensin receptor 2 82.79% 100.00%
CHEMBL5028 O14672 ADAM10 80.73% 97.50%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 80.15% 95.17%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 53355348
LOTUS LTS0060190
wikiData Q77490896