(2S,3S,4S,5S,6R)-2-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-2-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S,18S,19S)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-19-yl]oxy-6-methyloxan-4-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID e12dbebf-fd39-4cb5-992b-852ea2ff995c
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3S,4S,5S,6R)-2-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-2-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S,18S,19S)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-19-yl]oxy-6-methyloxan-4-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC(C6C5(CCC(C6)O)C)OC7C(C(C(C(O7)C)O)OC8C(C(C(C(O8)C)O)O)O)O)C)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4C[C@@H]([C@@H]6[C@@]5(CC[C@@H](C6)O)C)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)C)O)O[C@H]8[C@H]([C@H]([C@@H]([C@H](O8)C)O)O)O)O)C)C)OC1
InChI InChI=1S/C39H64O12/c1-17-7-12-39(46-16-17)18(2)28-27(51-39)15-24-22-14-26(25-13-21(40)8-10-37(25,5)23(22)9-11-38(24,28)6)49-36-33(45)34(30(42)20(4)48-36)50-35-32(44)31(43)29(41)19(3)47-35/h17-36,40-45H,7-16H2,1-6H3/t17-,18+,19-,20-,21+,22-,23+,24+,25-,26+,27+,28+,29-,30-,31+,32+,33-,34+,35+,36+,37-,38+,39-/m1/s1
InChI Key XASDQEOMZDFLDT-QGYWBVHWSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C39H64O12
Molecular Weight 724.90 g/mol
Exact Mass 724.43977747 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 2.47
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S,4S,5S,6R)-2-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-2-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S,18S,19S)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-19-yl]oxy-6-methyloxan-4-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7873 78.73%
Caco-2 - 0.8698 86.98%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.6693 66.93%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9024 90.24%
OATP1B3 inhibitior + 0.9337 93.37%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior - 0.8793 87.93%
P-glycoprotein inhibitior + 0.7071 70.71%
P-glycoprotein substrate - 0.5924 59.24%
CYP3A4 substrate + 0.7404 74.04%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8067 80.67%
CYP3A4 inhibition - 0.9470 94.70%
CYP2C9 inhibition - 0.9339 93.39%
CYP2C19 inhibition - 0.9379 93.79%
CYP2D6 inhibition - 0.9534 95.34%
CYP1A2 inhibition - 0.8880 88.80%
CYP2C8 inhibition + 0.6618 66.18%
CYP inhibitory promiscuity - 0.9754 97.54%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6204 62.04%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9209 92.09%
Skin irritation - 0.6608 66.08%
Skin corrosion - 0.9367 93.67%
Ames mutagenesis - 0.7654 76.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6832 68.32%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.8750 87.50%
skin sensitisation - 0.9167 91.67%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.6438 64.38%
Acute Oral Toxicity (c) I 0.5639 56.39%
Estrogen receptor binding + 0.6023 60.23%
Androgen receptor binding + 0.6454 64.54%
Thyroid receptor binding - 0.5879 58.79%
Glucocorticoid receptor binding + 0.5703 57.03%
Aromatase binding + 0.6654 66.54%
PPAR gamma + 0.6268 62.68%
Honey bee toxicity - 0.5429 54.29%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.6300 63.00%
Fish aquatic toxicity + 0.8493 84.93%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1163125 O60885 Bromodomain-containing protein 4 96.41% 97.31%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.10% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.31% 91.11%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 91.15% 92.78%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.43% 100.00%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 88.66% 97.86%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.53% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.81% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.78% 92.94%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 87.49% 95.58%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.28% 94.45%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 87.15% 98.99%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.65% 89.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 86.39% 96.61%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.37% 95.89%
CHEMBL204 P00734 Thrombin 85.80% 96.01%
CHEMBL5255 O00206 Toll-like receptor 4 84.48% 92.50%
CHEMBL259 P32245 Melanocortin receptor 4 84.29% 95.38%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 84.26% 92.86%
CHEMBL221 P23219 Cyclooxygenase-1 84.00% 90.17%
CHEMBL237 P41145 Kappa opioid receptor 83.96% 98.10%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.74% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.20% 86.33%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 83.15% 96.38%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 83.03% 96.77%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 82.88% 89.05%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.50% 92.88%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.49% 96.95%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.87% 95.50%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.64% 93.04%
CHEMBL3922 P50579 Methionine aminopeptidase 2 81.48% 97.28%
CHEMBL233 P35372 Mu opioid receptor 80.75% 97.93%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum asperolanatum

Cross-Links

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PubChem 44559499
LOTUS LTS0244670
wikiData Q105324092