Destruxin D1

Details

Top
Internal ID 4abc9f0a-074b-4e5c-9231-4598bcce3b96
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name 3-(16-butan-2-yl-10,11,14-trimethyl-2,5,9,12,15,18-hexaoxo-13-propan-2-yl-4-oxa-1,8,11,14,17-pentazabicyclo[17.4.0]tricosan-3-yl)-2-methylpropanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C31H51N5O9/c1-9-18(4)24-29(41)35(8)25(17(2)3)30(42)34(7)20(6)26(38)32-14-13-23(37)45-22(16-19(5)31(43)44)28(40)36-15-11-10-12-21(36)27(39)33-24/h17-22,24-25H,9-16H2,1-8H3,(H,32,38)(H,33,39)(H,43,44)
InChI Key XTWWITLYEHFJBO-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C31H51N5O9
Molecular Weight 637.80 g/mol
Exact Mass 637.36867822 g/mol
Topological Polar Surface Area (TPSA) 183.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 0.77
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 6

Synonyms

Top
Destruxin D1
DTXSID801000437
beta-Alanine, 4-carboxy-2-hydroxypentanoyl-2-piperidinecarbonyl-L-isoleucyl-N-methyl-L-valyl-N-methyl-L-alanyl-, (6->1)-lactone 5
3-[3-(Butan-2-yl)-1,10-dihydroxy-5,8,9-trimethyl-4,7,14,17-tetraoxo-6-(propan-2-yl)-3,5,6,7,8,9,12,13,14,16,17,19,20,21,22,22a-hexadecahydro-4H-pyrido[1,2-d][1,4,7,10,13,16]oxapentaazacyclononadecin-16-yl]-2-methylpropanoic acid

2D Structure

Top
2D Structure of Destruxin D1

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7901 79.01%
Caco-2 - 0.8128 81.28%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Lysosomes 0.5127 51.27%
OATP2B1 inhibitior - 0.5712 57.12%
OATP1B1 inhibitior + 0.8261 82.61%
OATP1B3 inhibitior + 0.9165 91.65%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.4685 46.85%
P-glycoprotein inhibitior + 0.6951 69.51%
P-glycoprotein substrate + 0.7508 75.08%
CYP3A4 substrate + 0.6410 64.10%
CYP2C9 substrate + 0.6063 60.63%
CYP2D6 substrate - 0.8654 86.54%
CYP3A4 inhibition - 0.9608 96.08%
CYP2C9 inhibition - 0.8434 84.34%
CYP2C19 inhibition - 0.8438 84.38%
CYP2D6 inhibition - 0.9412 94.12%
CYP1A2 inhibition - 0.9454 94.54%
CYP2C8 inhibition - 0.6062 60.62%
CYP inhibitory promiscuity - 0.9928 99.28%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8700 87.00%
Carcinogenicity (trinary) Non-required 0.6084 60.84%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.9234 92.34%
Skin irritation - 0.7803 78.03%
Skin corrosion - 0.9221 92.21%
Ames mutagenesis - 0.7137 71.37%
Human Ether-a-go-go-Related Gene inhibition - 0.6005 60.05%
Micronuclear + 0.7400 74.00%
Hepatotoxicity + 0.5730 57.30%
skin sensitisation - 0.8925 89.25%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.8281 82.81%
Acute Oral Toxicity (c) III 0.6280 62.80%
Estrogen receptor binding + 0.7224 72.24%
Androgen receptor binding + 0.6091 60.91%
Thyroid receptor binding + 0.5391 53.91%
Glucocorticoid receptor binding + 0.6698 66.98%
Aromatase binding + 0.6299 62.99%
PPAR gamma + 0.6454 64.54%
Honey bee toxicity - 0.8607 86.07%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity - 0.7726 77.26%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.17% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.55% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.25% 97.25%
CHEMBL333 P08253 Matrix metalloproteinase-2 94.68% 96.31%
CHEMBL5103 Q969S8 Histone deacetylase 10 93.79% 90.08%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 91.49% 90.71%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 90.46% 93.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.31% 97.09%
CHEMBL4588 P22894 Matrix metalloproteinase 8 89.34% 94.66%
CHEMBL4616 Q92847 Ghrelin receptor 88.44% 92.00%
CHEMBL1902 P62942 FK506-binding protein 1A 87.92% 97.05%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.81% 93.56%
CHEMBL332 P03956 Matrix metalloproteinase-1 86.14% 94.50%
CHEMBL226 P30542 Adenosine A1 receptor 86.02% 95.93%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 84.90% 96.47%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.48% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.22% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.06% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.96% 99.23%
CHEMBL4072 P07858 Cathepsin B 83.17% 93.67%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 82.46% 90.24%
CHEMBL255 P29275 Adenosine A2b receptor 82.42% 98.59%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 82.41% 95.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.10% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.96% 86.33%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.60% 93.04%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.83% 95.50%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 80.73% 98.33%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 80.22% 82.38%
CHEMBL2413 P32246 C-C chemokine receptor type 1 80.21% 89.50%
CHEMBL2189110 Q15910 Histone-lysine N-methyltransferase EZH2 80.12% 97.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 157512
LOTUS LTS0034946
wikiData Q82994031