Deoxypalytoxin

Details

Top
Internal ID c59b53f7-8468-4bd5-942b-7487974e3c36
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (E,2S,3R,5R,8R,9S)-10-[(2R,3R,4R,5S,6R)-6-[(1S,2R,3S,4S,5R,11S)-12-[(1R,3S,5S,7R)-5-[(8S)-9-[(2R,3R,4R,5R,6S)-6-[(E,2S,3S,6S,9R,10R)-10-[(2S,4R,5S,6R)-6-[(2R,3R)-4-[(2R,3S,4R,5R,6S)-6-[(3Z,5E,8R,9S,10R,12Z,17S,18R,19R,20R)-21-[(2R,3R,4R,5S,6R)-6-[(Z,3R,4R)-5-[(1S,3R,5R,7R)-7-[2-[(2R,3R,5S)-5-(aminomethyl)-3-hydroxyoxolan-2-yl]ethyl]-2,6-dioxabicyclo[3.2.1]octan-3-yl]-3,4-dihydroxypent-1-enyl]-3,4,5-trihydroxyoxan-2-yl]-8,9,10,17,18,19-hexahydroxy-20-methyl-14-methylidenehenicosa-3,5,12-trienyl]-3,4,5-trihydroxyoxan-2-yl]-2,3-dihydroxybutyl]-4,5-dihydroxyoxan-2-yl]-2,6,9,10-tetrahydroxy-3-methyldec-4-enyl]-3,4,5,6-tetrahydroxyoxan-2-yl]-8-hydroxynonyl]-1,3-dimethyl-6,8-dioxabicyclo[3.2.1]octan-7-yl]-1,2,3,4,5-pentahydroxy-11-methyldodecyl]-3,4,5-trihydroxyoxan-2-yl]-2,5,8,9-tetrahydroxy-N-[(E)-3-(3-hydroxypropylamino)-3-oxoprop-1-enyl]-3,7-dimethyldec-6-enamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C129H223N3O53/c1-63(31-35-81(142)108(157)103(152)69(7)49-94-112(161)118(167)111(160)92(180-94)38-37-76(137)82(143)52-73-51-74-54-93(177-73)90(176-74)40-39-89-85(146)53-75(62-130)178-89)25-22-29-78(139)105(154)77(138)27-18-12-9-13-20-30-91-110(159)117(166)113(162)97(179-91)56-84(145)83(144)55-95-107(156)87(148)58-96(181-95)106(155)80(141)36-34-70(134)33-32-66(4)88(149)61-129(175)125(173)123(172)115(164)99(183-129)50-71(135)26-17-11-10-14-21-42-128-60-65(3)59-127(8,185-128)100(184-128)46-64(2)24-16-15-19-28-79(140)109(158)116(165)120(169)122(171)124-121(170)119(168)114(163)98(182-124)57-86(147)102(151)67(5)47-72(136)48-68(6)104(153)126(174)132-44-41-101(150)131-43-23-45-133/h9,12-13,18,22,25,32-33,37-38,41,44,47,64-66,68-100,102-125,133-149,151-173,175H,1,10-11,14-17,19-21,23-24,26-31,34-36,39-40,42-43,45-46,48-62,130H2,2-8H3,(H,131,150)(H,132,174)/b13-9-,18-12+,25-22-,33-32+,38-37-,44-41+,67-47+/t64-,65-,66-,68+,69+,70+,71-,72-,73-,74+,75-,76+,77+,78+,79+,80+,81-,82+,83+,84+,85+,86-,87+,88-,89+,90+,91-,92+,93-,94+,95+,96-,97+,98+,99+,100+,102+,103+,104-,105-,106+,107-,108+,109-,110-,111+,112-,113+,114-,115-,116-,117+,118-,119+,120+,121-,122-,123+,124-,125+,127+,128-,129-/m0/s1
InChI Key GNUXTROKUYRQMR-DJTXWYTBSA-N
Popularity 4 references in papers

Physical and Chemical Properties

Top
Molecular Formula C129H223N3O53
Molecular Weight 2664.10 g/mol
Exact Mass 2663.4880338 g/mol
Topological Polar Surface Area (TPSA) 1010.00 Ų
XlogP -5.50
Atomic LogP (AlogP) -7.61
H-Bond Acceptor 54
H-Bond Donor 44
Rotatable Bonds 80

Synonyms

Top
DTXSID201334979

2D Structure

Top
2D Structure of Deoxypalytoxin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7164 71.64%
Caco-2 - 0.8583 85.83%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.5749 57.49%
OATP2B1 inhibitior - 0.8636 86.36%
OATP1B1 inhibitior + 0.7944 79.44%
OATP1B3 inhibitior + 0.9363 93.63%
MATE1 inhibitior - 0.9012 90.12%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9494 94.94%
P-glycoprotein inhibitior + 0.7416 74.16%
P-glycoprotein substrate + 0.8668 86.68%
CYP3A4 substrate + 0.7670 76.70%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8639 86.39%
CYP3A4 inhibition - 0.9257 92.57%
CYP2C9 inhibition - 0.8665 86.65%
CYP2C19 inhibition - 0.8465 84.65%
CYP2D6 inhibition - 0.9186 91.86%
CYP1A2 inhibition - 0.8708 87.08%
CYP2C8 inhibition + 0.8826 88.26%
CYP inhibitory promiscuity - 0.9377 93.77%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.4815 48.15%
Eye corrosion - 0.9843 98.43%
Eye irritation - 0.8961 89.61%
Skin irritation - 0.7224 72.24%
Skin corrosion - 0.9172 91.72%
Ames mutagenesis - 0.5678 56.78%
Human Ether-a-go-go-Related Gene inhibition + 0.7517 75.17%
Micronuclear + 0.6900 69.00%
Hepatotoxicity + 0.5584 55.84%
skin sensitisation - 0.8313 83.13%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.5864 58.64%
Acute Oral Toxicity (c) III 0.5955 59.55%
Estrogen receptor binding + 0.7136 71.36%
Androgen receptor binding + 0.7724 77.24%
Thyroid receptor binding + 0.7171 71.71%
Glucocorticoid receptor binding + 0.8066 80.66%
Aromatase binding + 0.6887 68.87%
PPAR gamma + 0.8229 82.29%
Honey bee toxicity - 0.5833 58.33%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.8797 87.97%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.87% 91.11%
CHEMBL325 Q13547 Histone deacetylase 1 99.24% 95.92%
CHEMBL2581 P07339 Cathepsin D 99.10% 98.95%
CHEMBL204 P00734 Thrombin 97.60% 96.01%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.47% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 97.09% 99.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.86% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 96.67% 94.73%
CHEMBL4227 P25090 Lipoxin A4 receptor 96.41% 100.00%
CHEMBL221 P23219 Cyclooxygenase-1 96.33% 90.17%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 96.31% 96.95%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 96.31% 97.21%
CHEMBL1937 Q92769 Histone deacetylase 2 96.27% 94.75%
CHEMBL226 P30542 Adenosine A1 receptor 95.13% 95.93%
CHEMBL2514 O95665 Neurotensin receptor 2 94.91% 100.00%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 94.86% 89.67%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 94.82% 91.24%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.41% 89.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 93.09% 97.29%
CHEMBL3359 P21462 Formyl peptide receptor 1 92.41% 93.56%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 91.97% 93.10%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 91.90% 96.47%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 91.75% 98.33%
CHEMBL2094135 Q96BI3 Gamma-secretase 91.65% 98.05%
CHEMBL340 P08684 Cytochrome P450 3A4 91.53% 91.19%
CHEMBL2964 P36507 Dual specificity mitogen-activated protein kinase kinase 2 91.26% 80.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.22% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.06% 86.33%
CHEMBL2001 Q9H244 Purinergic receptor P2Y12 90.60% 96.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 90.34% 96.38%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.77% 97.14%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 89.76% 92.32%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 89.42% 95.71%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 88.80% 96.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.74% 95.89%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 88.62% 98.75%
CHEMBL4296 Q15858 Sodium channel protein type IX alpha subunit 88.57% 96.11%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 88.49% 95.50%
CHEMBL236 P41143 Delta opioid receptor 88.28% 99.35%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 88.23% 91.07%
CHEMBL5103 Q969S8 Histone deacetylase 10 87.91% 90.08%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 87.78% 95.00%
CHEMBL2413 P32246 C-C chemokine receptor type 1 87.41% 89.50%
CHEMBL220 P22303 Acetylcholinesterase 87.32% 94.45%
CHEMBL4581 P52732 Kinesin-like protein 1 87.30% 93.18%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.24% 95.50%
CHEMBL3310 Q96DB2 Histone deacetylase 11 87.03% 88.56%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 86.67% 89.44%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 86.54% 96.90%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.38% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.13% 95.56%
CHEMBL1075317 P61964 WD repeat-containing protein 5 86.07% 96.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.16% 95.89%
CHEMBL5028 O14672 ADAM10 83.18% 97.50%
CHEMBL2179 P04062 Beta-glucocerebrosidase 83.11% 85.31%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.02% 97.25%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 81.61% 97.33%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 81.19% 85.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.02% 100.00%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 80.80% 91.03%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.23% 99.23%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 138453968
LOTUS LTS0021384
wikiData Q105013368