Delphinidin 3-xyloside

Details

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Internal ID 1951c44b-1bed-4dd2-bec3-fdb8419f2182
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Anthocyanins > Anthocyanidin-3-O-glycosides
IUPAC Name 5-[3-[(2S,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-5,7-dihydroxychromenylium-2-yl]benzene-1,2,3-triol
SMILES (Canonical) C1=C(C=C(C(=C1O)O)O)C2=[O+]C3=CC(=CC(=C3C=C2OC4C(C(C(O4)CO)O)O)O)O
SMILES (Isomeric) C1=C(C=C(C(=C1O)O)O)C2=[O+]C3=CC(=CC(=C3C=C2O[C@H]4[C@@H]([C@H]([C@H](O4)CO)O)O)O)O
InChI InChI=1S/C20H18O11/c21-6-15-17(27)18(28)20(31-15)30-14-5-9-10(23)3-8(22)4-13(9)29-19(14)7-1-11(24)16(26)12(25)2-7/h1-5,15,17-18,20-21,27-28H,6H2,(H4-,22,23,24,25,26)/p+1/t15-,17+,18-,20-/m1/s1
InChI Key WIEYMFHXYNRELM-MJKGWSOKSA-O
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C20H19O11+
Molecular Weight 435.40 g/mol
Exact Mass 435.09273642 g/mol
Topological Polar Surface Area (TPSA) 181.00 Ų
XlogP 0.00
Atomic LogP (AlogP) 0.73
H-Bond Acceptor 10
H-Bond Donor 8
Rotatable Bonds 4

Synonyms

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Delphinidin 3-O-xyloside
DTXSID501341501

2D Structure

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2D Structure of Delphinidin 3-xyloside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7078 70.78%
Caco-2 - 0.8874 88.74%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.5496 54.96%
OATP2B1 inhibitior + 0.5864 58.64%
OATP1B1 inhibitior + 0.8824 88.24%
OATP1B3 inhibitior + 0.9417 94.17%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.6328 63.28%
P-glycoprotein inhibitior - 0.6263 62.63%
P-glycoprotein substrate - 0.8404 84.04%
CYP3A4 substrate + 0.5558 55.58%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8268 82.68%
CYP3A4 inhibition - 0.9058 90.58%
CYP2C9 inhibition - 0.8499 84.99%
CYP2C19 inhibition - 0.7702 77.02%
CYP2D6 inhibition - 0.8598 85.98%
CYP1A2 inhibition - 0.8307 83.07%
CYP2C8 inhibition + 0.7463 74.63%
CYP inhibitory promiscuity - 0.5946 59.46%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5592 55.92%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.6712 67.12%
Skin irritation - 0.8017 80.17%
Skin corrosion - 0.9556 95.56%
Ames mutagenesis - 0.6754 67.54%
Human Ether-a-go-go-Related Gene inhibition - 0.4023 40.23%
Micronuclear + 0.6659 66.59%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.8887 88.87%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.8364 83.64%
Acute Oral Toxicity (c) III 0.5452 54.52%
Estrogen receptor binding + 0.8189 81.89%
Androgen receptor binding + 0.7095 70.95%
Thyroid receptor binding + 0.5877 58.77%
Glucocorticoid receptor binding + 0.7924 79.24%
Aromatase binding + 0.7669 76.69%
PPAR gamma + 0.7830 78.30%
Honey bee toxicity - 0.7973 79.73%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6049 60.49%
Fish aquatic toxicity + 0.8195 81.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.53% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.60% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.40% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.10% 96.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.37% 99.15%
CHEMBL3194 P02766 Transthyretin 90.16% 90.71%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.10% 92.94%
CHEMBL1951 P21397 Monoamine oxidase A 88.93% 91.49%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.81% 99.17%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 88.64% 83.57%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.76% 97.36%
CHEMBL2424 Q04760 Glyoxalase I 84.78% 91.67%
CHEMBL1937 Q92769 Histone deacetylase 2 84.16% 94.75%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 83.69% 95.78%
CHEMBL3401 O75469 Pregnane X receptor 82.82% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.65% 97.09%
CHEMBL2581 P07339 Cathepsin D 82.03% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.73% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.87% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lindera erythrocarpa
Ribes rubrum

Cross-Links

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PubChem 134775899
LOTUS LTS0111612
wikiData Q105139137