(1R,2S,3R,5S,6R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8-azabicyclo[3.2.1]octane-1,2,6-triol

Details

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Internal ID 986457dd-221f-4769-9bc7-a349527d97d5
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (1R,2S,3R,5S,6R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8-azabicyclo[3.2.1]octane-1,2,6-triol
SMILES (Canonical) C1C2C(CC(N2)(C(C1OC3C(C(C(C(O3)CO)O)O)O)O)O)O
SMILES (Isomeric) C1[C@H]2[C@@H](C[C@](N2)([C@H]([C@@H]1O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O)O
InChI InChI=1S/C13H23NO9/c15-3-7-8(17)9(18)10(19)12(23-7)22-6-1-4-5(16)2-13(21,14-4)11(6)20/h4-12,14-21H,1-3H2/t4-,5+,6+,7+,8+,9-,10+,11-,12+,13+/m0/s1
InChI Key CNHUGSNUWDJJDJ-HVPXXEMXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C13H23NO9
Molecular Weight 337.32 g/mol
Exact Mass 337.13728131 g/mol
Topological Polar Surface Area (TPSA) 172.00 Ų
XlogP -4.00
Atomic LogP (AlogP) -4.65
H-Bond Acceptor 10
H-Bond Donor 8
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,2S,3R,5S,6R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-8-azabicyclo[3.2.1]octane-1,2,6-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8060 80.60%
Caco-2 - 0.9381 93.81%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.4182 41.82%
OATP2B1 inhibitior - 0.8570 85.70%
OATP1B1 inhibitior + 0.9317 93.17%
OATP1B3 inhibitior + 0.9470 94.70%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.9801 98.01%
P-glycoprotein inhibitior - 0.9110 91.10%
P-glycoprotein substrate - 0.8980 89.80%
CYP3A4 substrate + 0.5601 56.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8202 82.02%
CYP3A4 inhibition - 0.9836 98.36%
CYP2C9 inhibition - 0.9352 93.52%
CYP2C19 inhibition - 0.9180 91.80%
CYP2D6 inhibition - 0.9102 91.02%
CYP1A2 inhibition - 0.9186 91.86%
CYP2C8 inhibition - 0.8718 87.18%
CYP inhibitory promiscuity - 0.9327 93.27%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6810 68.10%
Eye corrosion - 0.9877 98.77%
Eye irritation - 0.9806 98.06%
Skin irritation - 0.7835 78.35%
Skin corrosion - 0.9305 93.05%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4926 49.26%
Micronuclear + 0.7000 70.00%
Hepatotoxicity - 0.7353 73.53%
skin sensitisation - 0.8554 85.54%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity - 0.5679 56.79%
Acute Oral Toxicity (c) III 0.5432 54.32%
Estrogen receptor binding - 0.6598 65.98%
Androgen receptor binding - 0.5960 59.60%
Thyroid receptor binding + 0.6697 66.97%
Glucocorticoid receptor binding - 0.6069 60.69%
Aromatase binding + 0.7695 76.95%
PPAR gamma + 0.6128 61.28%
Honey bee toxicity - 0.6852 68.52%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity - 0.8713 87.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.19% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.69% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.79% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 93.52% 95.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.97% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.75% 94.45%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.60% 96.21%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.27% 86.92%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.10% 85.14%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.73% 96.61%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.00% 95.89%
CHEMBL3589 P55263 Adenosine kinase 81.13% 98.05%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 81.11% 94.23%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.93% 95.50%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 80.63% 89.67%
CHEMBL1937 Q92769 Histone deacetylase 2 80.47% 94.75%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.42% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Nicandra physalodes

Cross-Links

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PubChem 101697669
LOTUS LTS0015345
wikiData Q104965798