daphmanidin A

Details

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Internal ID 6ccdfaa7-1b10-434d-9d91-87a9948925a2
Taxonomy Organoheterocyclic compounds > Indoles and derivatives
IUPAC Name methyl (1R,5S,6R,9R,10S,16R,17R,20R)-9-(acetyloxymethyl)-20-hydroxy-5-methyl-3-azahexacyclo[11.5.1.16,10.01,9.02,6.016,19]icosa-2,13(19)-diene-17-carboxylate
SMILES (Canonical) CC1CN=C2C13CCC4(C25CC(C6C5=C(CC6)CCC4C3O)C(=O)OC)COC(=O)C
SMILES (Isomeric) C[C@@H]1CN=C2[C@@]13CC[C@@]4([C@]25C[C@H]([C@@H]6C5=C(CC6)CC[C@@H]4[C@H]3O)C(=O)OC)COC(=O)C
InChI InChI=1S/C25H33NO5/c1-13-11-26-22-24(13)9-8-23(12-31-14(2)27)18(20(24)28)7-5-15-4-6-16-17(21(29)30-3)10-25(22,23)19(15)16/h13,16-18,20,28H,4-12H2,1-3H3/t13-,16-,17-,18-,20-,23-,24+,25+/m1/s1
InChI Key JVDVDUKDRSBISE-GWILNFDUSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C25H33NO5
Molecular Weight 427.50 g/mol
Exact Mass 427.23587315 g/mol
Topological Polar Surface Area (TPSA) 85.20 Ų
XlogP 0.90
Atomic LogP (AlogP) 3.08
H-Bond Acceptor 6
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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CHEMBL519114
Methyl (1R,5S,6R,9R,10S,16R,17R,20R)-9-(acetyloxymethyl)-20-hydroxy-5-methyl-3-azahexacyclo[11.5.1.16,10.01,9.02,6.016,19]icosa-2,13(19)-diene-17-carboxylate

2D Structure

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2D Structure of daphmanidin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9508 95.08%
Caco-2 + 0.5512 55.12%
Blood Brain Barrier + 0.7500 75.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.8118 81.18%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8897 88.97%
OATP1B3 inhibitior + 0.9279 92.79%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5771 57.71%
BSEP inhibitior + 0.6333 63.33%
P-glycoprotein inhibitior - 0.5948 59.48%
P-glycoprotein substrate + 0.5439 54.39%
CYP3A4 substrate + 0.7034 70.34%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8383 83.83%
CYP3A4 inhibition - 0.8078 80.78%
CYP2C9 inhibition - 0.6645 66.45%
CYP2C19 inhibition - 0.7306 73.06%
CYP2D6 inhibition - 0.8644 86.44%
CYP1A2 inhibition - 0.6356 63.56%
CYP2C8 inhibition + 0.5298 52.98%
CYP inhibitory promiscuity - 0.7479 74.79%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5510 55.10%
Eye corrosion - 0.9853 98.53%
Eye irritation - 0.8408 84.08%
Skin irritation - 0.7183 71.83%
Skin corrosion - 0.9256 92.56%
Ames mutagenesis - 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear - 0.5300 53.00%
Hepatotoxicity - 0.6372 63.72%
skin sensitisation - 0.8312 83.12%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity + 0.5686 56.86%
Acute Oral Toxicity (c) III 0.6176 61.76%
Estrogen receptor binding + 0.8935 89.35%
Androgen receptor binding + 0.7671 76.71%
Thyroid receptor binding - 0.5156 51.56%
Glucocorticoid receptor binding + 0.8734 87.34%
Aromatase binding + 0.6532 65.32%
PPAR gamma + 0.5474 54.74%
Honey bee toxicity - 0.6693 66.93%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9779 97.79%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.88% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.37% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.28% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.15% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 89.60% 91.11%
CHEMBL2243 O00519 Anandamide amidohydrolase 89.53% 97.53%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.27% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 86.83% 94.33%
CHEMBL2581 P07339 Cathepsin D 86.74% 98.95%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 83.76% 96.90%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.18% 95.50%
CHEMBL2664 P23526 Adenosylhomocysteinase 82.01% 86.67%
CHEMBL5028 O14672 ADAM10 80.84% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Daphniphyllum pentandrum

Cross-Links

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PubChem 10895219
LOTUS LTS0166548
wikiData Q105135622