(4E,6E,8E,10E,12E,14E,16E)-3-[(3S,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyl-tetrahydropyran-2-yl]oxy-19-[6-(4-aminophenyl)-4-hydroxy-1,3-dimethyl-6-oxo-hexyl]-29,31,33,35,37-pentahydroxy-18-methyl-21,23,27-trioxo-20,39-dioxabicyclo[33.3.1]nonatriaconta-4,6,8,10,12,14,16-heptaene-38-carboxylic acid

Details

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Internal ID 04d2d936-464e-4edc-b88f-17cbee4dc1ea
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (19E,21E,23E,25E,27E,29E,31E)-33-[(3S,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyloxan-2-yl]oxy-17-[7-(4-aminophenyl)-5-hydroxy-4-methyl-7-oxoheptan-2-yl]-1,3,5,7,37-pentahydroxy-18-methyl-9,13,15-trioxo-16,39-dioxabicyclo[33.3.1]nonatriaconta-19,21,23,25,27,29,31-heptaene-36-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C59H84N2O18/c1-35-18-15-13-11-9-7-5-6-8-10-12-14-16-21-46(77-58-55(72)53(61)54(71)38(4)76-58)31-50-52(57(73)74)49(69)34-59(75,79-50)33-45(66)29-44(65)28-43(64)27-41(62)19-17-20-42(63)30-51(70)78-56(35)37(3)26-36(2)47(67)32-48(68)39-22-24-40(60)25-23-39/h5-16,18,21-25,35-38,43-47,49-50,52-56,58,64-67,69,71-72,75H,17,19-20,26-34,60-61H2,1-4H3,(H,73,74)/b6-5+,9-7+,10-8+,13-11+,14-12+,18-15+,21-16+/t35?,36?,37?,38-,43?,44?,45?,46?,47?,49?,50?,52?,53+,54-,55+,56?,58?,59?/m1/s1
InChI Key YKSVGLFNJPQDJE-NINSUVFSSA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C59H84N2O18
Molecular Weight 1109.30 g/mol
Exact Mass 1108.57191383 g/mol
Topological Polar Surface Area (TPSA) 356.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 3.77
H-Bond Acceptor 19
H-Bond Donor 11
Rotatable Bonds 10

Synonyms

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FR-008-III
SCHEMBL22989847
CPD-13108
DAP001325
CID6474902
(4E,6E,8E,10E,12E,14E,16E)-3-[(3S,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyl-tetrahydropyran-2-yl]oxy-19-[6-(4-aminophenyl)-4-hydroxy-1,3-dimethyl-6-oxo-hexyl]-29,31,33,35,37-pentahydroxy-18-methyl-21,23,27-trioxo-20,39-dioxabicyclo[33.3.1]nonatriaconta-4,6,8,10,12,14,16-heptaene-38-carboxylic acid

2D Structure

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2D Structure of (4E,6E,8E,10E,12E,14E,16E)-3-[(3S,4S,5S,6R)-4-amino-3,5-dihydroxy-6-methyl-tetrahydropyran-2-yl]oxy-19-[6-(4-aminophenyl)-4-hydroxy-1,3-dimethyl-6-oxo-hexyl]-29,31,33,35,37-pentahydroxy-18-methyl-21,23,27-trioxo-20,39-dioxabicyclo[33.3.1]nonatriaconta-4,6,8,10,12,14,16-heptaene-38-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9249 92.49%
Caco-2 - 0.8619 86.19%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.9429 94.29%
Subcellular localzation Mitochondria 0.4166 41.66%
OATP2B1 inhibitior - 0.8637 86.37%
OATP1B1 inhibitior + 0.8617 86.17%
OATP1B3 inhibitior + 0.9386 93.86%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9802 98.02%
P-glycoprotein inhibitior + 0.7428 74.28%
P-glycoprotein substrate + 0.7985 79.85%
CYP3A4 substrate + 0.7228 72.28%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8543 85.43%
CYP3A4 inhibition - 0.8064 80.64%
CYP2C9 inhibition - 0.9212 92.12%
CYP2C19 inhibition - 0.8723 87.23%
CYP2D6 inhibition - 0.9092 90.92%
CYP1A2 inhibition - 0.8668 86.68%
CYP2C8 inhibition + 0.8577 85.77%
CYP inhibitory promiscuity - 0.9525 95.25%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5499 54.99%
Eye corrosion - 0.9886 98.86%
Eye irritation - 0.8993 89.93%
Skin irritation - 0.7520 75.20%
Skin corrosion - 0.9287 92.87%
Ames mutagenesis - 0.5937 59.37%
Human Ether-a-go-go-Related Gene inhibition + 0.7517 75.17%
Micronuclear + 0.7800 78.00%
Hepatotoxicity + 0.6658 66.58%
skin sensitisation - 0.8698 86.98%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.5791 57.91%
Acute Oral Toxicity (c) III 0.6806 68.06%
Estrogen receptor binding + 0.7989 79.89%
Androgen receptor binding + 0.6207 62.07%
Thyroid receptor binding + 0.6476 64.76%
Glucocorticoid receptor binding + 0.7890 78.90%
Aromatase binding + 0.5306 53.06%
PPAR gamma + 0.8092 80.92%
Honey bee toxicity - 0.6451 64.51%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9609 96.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.70% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.17% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.32% 97.09%
CHEMBL221 P23219 Cyclooxygenase-1 97.24% 90.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 97.18% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.46% 95.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.38% 97.25%
CHEMBL2581 P07339 Cathepsin D 94.90% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 92.85% 95.89%
CHEMBL4208 P20618 Proteasome component C5 92.76% 90.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 89.50% 93.56%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 88.08% 95.50%
CHEMBL4227 P25090 Lipoxin A4 receptor 87.52% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.25% 89.00%
CHEMBL2535 P11166 Glucose transporter 84.63% 98.75%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 83.40% 98.75%
CHEMBL3714130 P46095 G-protein coupled receptor 6 83.32% 97.36%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.22% 99.23%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 82.33% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.48% 91.07%
CHEMBL3401 O75469 Pregnane X receptor 80.57% 94.73%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.51% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 11953885
LOTUS LTS0138401
wikiData Q105349870