16-Deoxycucurbitacin B

Details

Top
Internal ID baaf7b1e-695e-4cc3-b3a7-49054c5152b3
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Cucurbitacins
IUPAC Name [(E,6R)-6-hydroxy-6-[(2S,8S,9R,10R,13R,14S,17S)-2-hydroxy-4,4,9,13,14-pentamethyl-3,11-dioxo-2,7,8,10,12,15,16,17-octahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-5-oxohept-3-en-2-yl] acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C32H46O7/c1-18(33)39-27(2,3)14-13-24(35)32(9,38)23-12-15-29(6)22-11-10-19-20(16-21(34)26(37)28(19,4)5)31(22,8)25(36)17-30(23,29)7/h10,13-14,20-23,34,38H,11-12,15-17H2,1-9H3/b14-13+/t20-,21+,22+,23+,29+,30-,31+,32-/m1/s1
InChI Key BXYMOPHDFDLMEA-LTFRKHHZSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C32H46O7
Molecular Weight 542.70 g/mol
Exact Mass 542.32435380 g/mol
Topological Polar Surface Area (TPSA) 118.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 4.53
H-Bond Acceptor 7
H-Bond Donor 2
Rotatable Bonds 5

Synonyms

Top
[(E,6R)-6-Hydroxy-6-[(2S,8S,9R,10R,13R,14S,17S)-2-hydroxy-4,4,9,13,14-pentamethyl-3,11-dioxo-2,7,8,10,12,15,16,17-octahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-5-oxohept-3-en-2-yl] acetate

2D Structure

Top
2D Structure of 16-Deoxycucurbitacin B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9924 99.24%
Caco-2 - 0.6902 69.02%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.8864 88.64%
OATP2B1 inhibitior - 0.8560 85.60%
OATP1B1 inhibitior + 0.8361 83.61%
OATP1B3 inhibitior - 0.3815 38.15%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.6103 61.03%
BSEP inhibitior + 0.9527 95.27%
P-glycoprotein inhibitior + 0.7310 73.10%
P-glycoprotein substrate - 0.5483 54.83%
CYP3A4 substrate + 0.7207 72.07%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9083 90.83%
CYP3A4 inhibition - 0.8505 85.05%
CYP2C9 inhibition - 0.8314 83.14%
CYP2C19 inhibition - 0.8973 89.73%
CYP2D6 inhibition - 0.9461 94.61%
CYP1A2 inhibition - 0.8418 84.18%
CYP2C8 inhibition + 0.6081 60.81%
CYP inhibitory promiscuity - 0.9217 92.17%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6553 65.53%
Eye corrosion - 0.9943 99.43%
Eye irritation - 0.9100 91.00%
Skin irritation + 0.6980 69.80%
Skin corrosion - 0.9507 95.07%
Ames mutagenesis - 0.7900 79.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4779 47.79%
Micronuclear - 0.6900 69.00%
Hepatotoxicity + 0.5125 51.25%
skin sensitisation - 0.7243 72.43%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 1.0000 100.00%
Mitochondrial toxicity + 0.9875 98.75%
Nephrotoxicity + 0.5407 54.07%
Acute Oral Toxicity (c) IV 0.4345 43.45%
Estrogen receptor binding + 0.7226 72.26%
Androgen receptor binding + 0.7198 71.98%
Thyroid receptor binding + 0.6552 65.52%
Glucocorticoid receptor binding + 0.7921 79.21%
Aromatase binding + 0.7610 76.10%
PPAR gamma + 0.6024 60.24%
Honey bee toxicity - 0.7328 73.28%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9972 99.72%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.72% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.18% 94.45%
CHEMBL1902 P62942 FK506-binding protein 1A 94.28% 97.05%
CHEMBL2581 P07339 Cathepsin D 93.67% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.83% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.41% 97.09%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 90.69% 82.69%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.43% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.47% 86.33%
CHEMBL340 P08684 Cytochrome P450 3A4 87.65% 91.19%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.75% 97.25%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.44% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 85.28% 93.04%
CHEMBL1937 Q92769 Histone deacetylase 2 84.35% 94.75%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.61% 91.07%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.46% 96.95%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 83.22% 91.03%
CHEMBL2996 Q05655 Protein kinase C delta 82.52% 97.79%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.97% 99.23%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.59% 95.89%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.53% 93.03%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.43% 92.94%
CHEMBL4829 O00763 Acetyl-CoA carboxylase 2 80.56% 98.00%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 80.10% 89.34%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 16099539
LOTUS LTS0154528
wikiData Q77483669