[(Z,2S)-4-[[(2R,3R,5S,6S)-6-[(2E,4E)-5-[(3R,4R,5R,7S)-4-hydroxy-7-methyl-7-[2-[(6-{[6-{[5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl]amino}hexanoyl]amino}hexanoyl)amino]ethoxy]-1,6-dioxaspiro[2.5]octan-5-yl]-3-methylpenta-2,4-dienyl]-2,5-dimethyloxan-3-yl]carbamoyl]but-3-en-2-yl] acetate

Details

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Internal ID adc59317-58d1-4010-8afc-e5a4163e9f05
Taxonomy Organoheterocyclic compounds > Biotin and derivatives
IUPAC Name [(Z,2S)-5-[[(2R,3R,5S,6S)-6-[(2E,4E)-5-[(3R,4R,5R,7S)-7-[2-[6-[6-[5-[(3aS,4S,6aR)-2-oxo-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]hexanoylamino]hexanoylamino]ethoxy]-4-hydroxy-7-methyl-1,6-dioxaspiro[2.5]octan-5-yl]-3-methylpenta-2,4-dienyl]-2,5-dimethyloxan-3-yl]amino]-5-oxopent-3-en-2-yl] acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C51H82N6O12S/c1-33(19-22-40-34(2)29-38(36(4)68-40)55-46(62)24-21-35(3)67-37(5)58)20-23-41-48(63)51(32-66-51)31-50(6,69-41)65-28-27-54-45(61)17-10-8-14-25-52-43(59)16-9-7-13-26-53-44(60)18-12-11-15-42-47-39(30-70-42)56-49(64)57-47/h19-21,23-24,34-36,38-42,47-48,63H,7-18,22,25-32H2,1-6H3,(H,52,59)(H,53,60)(H,54,61)(H,55,62)(H2,56,57,64)/b23-20+,24-21-,33-19+/t34-,35-,36+,38+,39-,40-,41+,42-,47-,48+,50-,51+/m0/s1
InChI Key OJDXPBWKOFNPDR-YTQOOTMVSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C51H82N6O12S
Molecular Weight 1003.30 g/mol
Exact Mass 1002.57114325 g/mol
Topological Polar Surface Area (TPSA) 270.00 Ų
XlogP 3.10
Atomic LogP (AlogP) 4.53
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 29

Synonyms

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spliceostatin-A
CHEMBL1221944

2D Structure

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2D Structure of [(Z,2S)-4-[[(2R,3R,5S,6S)-6-[(2E,4E)-5-[(3R,4R,5R,7S)-4-hydroxy-7-methyl-7-[2-[(6-{[6-{[5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl]amino}hexanoyl]amino}hexanoyl)amino]ethoxy]-1,6-dioxaspiro[2.5]octan-5-yl]-3-methylpenta-2,4-dienyl]-2,5-dimethyloxan-3-yl]carbamoyl]but-3-en-2-yl] acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8461 84.61%
Caco-2 - 0.8549 85.49%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.5978 59.78%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8316 83.16%
OATP1B3 inhibitior + 0.9368 93.68%
MATE1 inhibitior - 0.9246 92.46%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9901 99.01%
P-glycoprotein inhibitior + 0.7520 75.20%
P-glycoprotein substrate + 0.8380 83.80%
CYP3A4 substrate + 0.7531 75.31%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8715 87.15%
CYP3A4 inhibition - 0.6853 68.53%
CYP2C9 inhibition - 0.7271 72.71%
CYP2C19 inhibition - 0.6978 69.78%
CYP2D6 inhibition - 0.8731 87.31%
CYP1A2 inhibition - 0.7702 77.02%
CYP2C8 inhibition + 0.8017 80.17%
CYP inhibitory promiscuity - 0.7194 71.94%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4989 49.89%
Eye corrosion - 0.9815 98.15%
Eye irritation - 0.9016 90.16%
Skin irritation - 0.7378 73.78%
Skin corrosion - 0.9167 91.67%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6762 67.62%
Micronuclear + 0.7200 72.00%
Hepatotoxicity + 0.5196 51.96%
skin sensitisation - 0.8306 83.06%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity + 0.6450 64.50%
Acute Oral Toxicity (c) III 0.5838 58.38%
Estrogen receptor binding + 0.8246 82.46%
Androgen receptor binding + 0.7312 73.12%
Thyroid receptor binding + 0.5384 53.84%
Glucocorticoid receptor binding + 0.6881 68.81%
Aromatase binding + 0.6513 65.13%
PPAR gamma + 0.7670 76.70%
Honey bee toxicity - 0.6417 64.17%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.6800 68.00%
Fish aquatic toxicity + 0.9309 93.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.59% 91.11%
CHEMBL2581 P07339 Cathepsin D 99.47% 98.95%
CHEMBL2179 P04062 Beta-glucocerebrosidase 98.24% 85.31%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 98.23% 89.34%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.18% 96.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 97.81% 96.77%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 97.08% 95.71%
CHEMBL1937 Q92769 Histone deacetylase 2 96.54% 94.75%
CHEMBL340 P08684 Cytochrome P450 3A4 93.91% 91.19%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.39% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 93.30% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 92.99% 94.73%
CHEMBL3524 P56524 Histone deacetylase 4 92.89% 92.97%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 92.63% 98.75%
CHEMBL299 P17252 Protein kinase C alpha 92.36% 98.03%
CHEMBL3922 P50579 Methionine aminopeptidase 2 92.20% 97.28%
CHEMBL2996 Q05655 Protein kinase C delta 92.03% 97.79%
CHEMBL3492 P49721 Proteasome Macropain subunit 90.79% 90.24%
CHEMBL1744525 P43490 Nicotinamide phosphoribosyltransferase 90.59% 96.25%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.44% 89.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 90.06% 96.90%
CHEMBL5255 O00206 Toll-like receptor 4 89.44% 92.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.08% 95.56%
CHEMBL5103 Q969S8 Histone deacetylase 10 88.83% 90.08%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.45% 94.45%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 88.25% 97.33%
CHEMBL2514 O95665 Neurotensin receptor 2 87.35% 100.00%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 87.12% 92.50%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 86.95% 98.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.89% 97.09%
CHEMBL4816 Q9Y243 Serine/threonine-protein kinase AKT3 86.71% 96.28%
CHEMBL2413 P32246 C-C chemokine receptor type 1 86.61% 89.50%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 85.88% 93.00%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 85.45% 85.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.20% 97.14%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 84.99% 96.47%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 84.52% 85.30%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 84.50% 91.03%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 84.43% 92.29%
CHEMBL3437 Q16853 Amine oxidase, copper containing 84.21% 94.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 84.16% 82.69%
CHEMBL1075317 P61964 WD repeat-containing protein 5 84.15% 96.33%
CHEMBL4660 P28907 Lymphocyte differentiation antigen CD38 84.04% 95.27%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.03% 100.00%
CHEMBL325 Q13547 Histone deacetylase 1 83.90% 95.92%
CHEMBL2094135 Q96BI3 Gamma-secretase 83.61% 98.05%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 83.47% 91.24%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.47% 91.07%
CHEMBL5957 P21589 5'-nucleotidase 83.27% 97.78%
CHEMBL2964 P36507 Dual specificity mitogen-activated protein kinase kinase 2 83.02% 80.00%
CHEMBL3975 P09467 Fructose-1,6-bisphosphatase 82.89% 92.95%
CHEMBL1829 O15379 Histone deacetylase 3 82.43% 95.00%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 82.31% 95.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 81.77% 85.14%
CHEMBL5028 O14672 ADAM10 80.99% 97.50%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 80.87% 89.67%
CHEMBL2001 Q9H244 Purinergic receptor P2Y12 80.86% 96.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.51% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 16204481
LOTUS LTS0164803
wikiData Q105193027