methyl (2S,3R,4S)-3-ethenyl-4-[[(1R)-2-methyl-1,3,4,9-tetrahydropyrido[3,4-b]indol-1-yl]methyl]-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-5-carboxylate

Details

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Internal ID 9c8153b4-a799-4d58-b47a-2dadd22b84c3
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (2S,3R,4S)-3-ethenyl-4-[[(1R)-2-methyl-1,3,4,9-tetrahydropyrido[3,4-b]indol-1-yl]methyl]-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-5-carboxylate
SMILES (Canonical) CN1CCC2=C(C1CC3C(C(OC=C3C(=O)OC)OC4C(C(C(C(O4)CO)O)O)O)C=C)NC5=CC=CC=C25
SMILES (Isomeric) CN1CCC2=C([C@H]1C[C@H]3[C@H]([C@@H](OC=C3C(=O)OC)O[C@@H]4[C@H]([C@@H]([C@H]([C@@H](O4)CO)O)O)O)C=C)NC5=CC=CC=C25
InChI InChI=1S/C28H36N2O9/c1-4-14-17(11-20-22-16(9-10-30(20)2)15-7-5-6-8-19(15)29-22)18(26(35)36-3)13-37-27(14)39-28-25(34)24(33)23(32)21(12-31)38-28/h4-8,13-14,17,20-21,23-25,27-29,31-34H,1,9-12H2,2-3H3/t14-,17+,20-,21+,23+,24-,25+,27+,28-/m1/s1
InChI Key SLMISZLSXLAAKK-ATICNBICSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H36N2O9
Molecular Weight 544.60 g/mol
Exact Mass 544.24208073 g/mol
Topological Polar Surface Area (TPSA) 154.00 Ų
XlogP 1.10
Atomic LogP (AlogP) 0.74
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (2S,3R,4S)-3-ethenyl-4-[[(1R)-2-methyl-1,3,4,9-tetrahydropyrido[3,4-b]indol-1-yl]methyl]-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-5-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8069 80.69%
Caco-2 - 0.7992 79.92%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.9000 90.00%
Subcellular localzation Lysosomes 0.3526 35.26%
OATP2B1 inhibitior - 0.8666 86.66%
OATP1B1 inhibitior + 0.7932 79.32%
OATP1B3 inhibitior + 0.9224 92.24%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.8500 85.00%
P-glycoprotein inhibitior + 0.6241 62.41%
P-glycoprotein substrate + 0.6240 62.40%
CYP3A4 substrate + 0.7382 73.82%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8058 80.58%
CYP3A4 inhibition - 0.9223 92.23%
CYP2C9 inhibition - 0.8270 82.70%
CYP2C19 inhibition - 0.8823 88.23%
CYP2D6 inhibition - 0.8378 83.78%
CYP1A2 inhibition - 0.7842 78.42%
CYP2C8 inhibition + 0.6153 61.53%
CYP inhibitory promiscuity - 0.8781 87.81%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6228 62.28%
Eye corrosion - 0.9861 98.61%
Eye irritation - 0.9561 95.61%
Skin irritation - 0.7498 74.98%
Skin corrosion - 0.9320 93.20%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8247 82.47%
Micronuclear + 0.7100 71.00%
Hepatotoxicity - 0.6091 60.91%
skin sensitisation - 0.8596 85.96%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.6267 62.67%
Acute Oral Toxicity (c) III 0.6421 64.21%
Estrogen receptor binding + 0.8081 80.81%
Androgen receptor binding + 0.6714 67.14%
Thyroid receptor binding + 0.5546 55.46%
Glucocorticoid receptor binding + 0.6489 64.89%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.6652 66.52%
Honey bee toxicity - 0.7291 72.91%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity + 0.9436 94.36%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.99% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.57% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.09% 95.56%
CHEMBL2581 P07339 Cathepsin D 92.81% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.82% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.92% 89.00%
CHEMBL5028 O14672 ADAM10 87.82% 97.50%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 86.80% 95.83%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.25% 95.89%
CHEMBL4208 P20618 Proteasome component C5 84.34% 90.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.13% 94.45%
CHEMBL220 P22303 Acetylcholinesterase 83.40% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.16% 99.23%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 81.87% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Strychnos gossweileri

Cross-Links

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PubChem 163185684
LOTUS LTS0012340
wikiData Q105255435