[(1R,3R,4R,5R,6S,10S,12S,13S,16R,18S,21R)-8-(1,2-dihydroxy-2-methylpropyl)-4,6,12,17,17-pentamethyl-18-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docos-7-en-3-yl] acetate

Details

Top
Internal ID cc094459-9d0b-4768-a38f-1738759cc0d1
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name [(1R,3R,4R,5R,6S,10S,12S,13S,16R,18S,21R)-8-(1,2-dihydroxy-2-methylpropyl)-4,6,12,17,17-pentamethyl-18-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docos-7-en-3-yl] acetate
SMILES (Canonical) CC1C=C(OC2C1C3(C(CC45CC46CCC(C(C6CCC5C3(C2)C)(C)C)OC7C(C(C(CO7)O)O)O)OC(=O)C)C)C(C(C)(C)O)O
SMILES (Isomeric) C[C@@H]1C=C(O[C@@H]2[C@H]1[C@]3([C@@H](C[C@@]45C[C@@]46CC[C@@H](C([C@@H]6CC[C@H]5[C@@]3(C2)C)(C)C)O[C@H]7[C@@H]([C@H]([C@@H](CO7)O)O)O)OC(=O)C)C)C(C(C)(C)O)O
InChI InChI=1S/C37H58O10/c1-18-13-21(30(42)33(5,6)43)46-22-14-34(7)24-10-9-23-32(3,4)25(47-31-29(41)28(40)20(39)16-44-31)11-12-36(23)17-37(24,36)15-26(45-19(2)38)35(34,8)27(18)22/h13,18,20,22-31,39-43H,9-12,14-17H2,1-8H3/t18-,20-,22+,23+,24+,25+,26-,27+,28+,29-,30?,31+,34+,35-,36-,37+/m1/s1
InChI Key KTGOQQJJZLHPBH-DEHGPYGLSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C37H58O10
Molecular Weight 662.80 g/mol
Exact Mass 662.40299804 g/mol
Topological Polar Surface Area (TPSA) 155.00 Ų
XlogP 3.50
Atomic LogP (AlogP) 3.45
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 5

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(1R,3R,4R,5R,6S,10S,12S,13S,16R,18S,21R)-8-(1,2-dihydroxy-2-methylpropyl)-4,6,12,17,17-pentamethyl-18-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docos-7-en-3-yl] acetate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8681 86.81%
Caco-2 - 0.8517 85.17%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7696 76.96%
OATP2B1 inhibitior - 0.8661 86.61%
OATP1B1 inhibitior + 0.8061 80.61%
OATP1B3 inhibitior + 0.9030 90.30%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.6437 64.37%
P-glycoprotein inhibitior + 0.7488 74.88%
P-glycoprotein substrate + 0.5678 56.78%
CYP3A4 substrate + 0.7258 72.58%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8782 87.82%
CYP3A4 inhibition - 0.9258 92.58%
CYP2C9 inhibition - 0.7662 76.62%
CYP2C19 inhibition - 0.8756 87.56%
CYP2D6 inhibition - 0.9390 93.90%
CYP1A2 inhibition - 0.8389 83.89%
CYP2C8 inhibition + 0.7410 74.10%
CYP inhibitory promiscuity - 0.9530 95.30%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6565 65.65%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9205 92.05%
Skin irritation - 0.5816 58.16%
Skin corrosion - 0.9383 93.83%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7518 75.18%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.6824 68.24%
skin sensitisation - 0.8637 86.37%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.6500 65.00%
Nephrotoxicity - 0.7456 74.56%
Acute Oral Toxicity (c) I 0.3626 36.26%
Estrogen receptor binding + 0.6313 63.13%
Androgen receptor binding + 0.7204 72.04%
Thyroid receptor binding - 0.5525 55.25%
Glucocorticoid receptor binding + 0.6506 65.06%
Aromatase binding + 0.6664 66.64%
PPAR gamma + 0.7010 70.10%
Honey bee toxicity - 0.6306 63.06%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9730 97.30%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.31% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.26% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.49% 97.25%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.71% 85.14%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 95.47% 96.77%
CHEMBL2581 P07339 Cathepsin D 93.46% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.28% 89.00%
CHEMBL340 P08684 Cytochrome P450 3A4 90.84% 91.19%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.62% 95.56%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.56% 97.14%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 89.53% 95.71%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 87.44% 92.88%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 86.74% 89.34%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.10% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.42% 100.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.17% 100.00%
CHEMBL5028 O14672 ADAM10 84.06% 97.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.01% 97.09%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.77% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.56% 91.07%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 83.52% 82.69%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.94% 96.61%
CHEMBL2413 P32246 C-C chemokine receptor type 1 82.79% 89.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.07% 94.45%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.33% 92.86%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 81.12% 82.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.62% 95.89%
CHEMBL2535 P11166 Glucose transporter 80.32% 98.75%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.24% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.08% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea cimicifuga

Cross-Links

Top
PubChem 118714767
LOTUS LTS0122127
wikiData Q105145783