3-[(3S,5R,8R,9S,10S,11R,13R,14S,17R)-3-[(2R,3R,4S,5R,6S)-3,4-dihydroxy-6-methyl-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-11,14-dihydroxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

Details

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Internal ID bc007ee0-e4e1-47a0-aa4c-c31597161a23
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Cardenolides and derivatives > Cardenolide glycosides and derivatives
IUPAC Name 3-[(3S,5R,8R,9S,10S,11R,13R,14S,17R)-3-[(2R,3R,4S,5R,6S)-3,4-dihydroxy-6-methyl-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-11,14-dihydroxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(OC(C(C2O)O)OC3CCC4(C(C3)CCC5C4C(CC6(C5(CCC6C7=CC(=O)OC7)O)C)O)C)C)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@H]2[C@@H](O[C@H]([C@@H]([C@@H]2O)O)O[C@H]3CC[C@]4([C@@H](C3)CC[C@@H]5[C@@H]4[C@@H](C[C@]6([C@@]5(CC[C@@H]6C7=CC(=O)OC7)O)C)O)C)C)O)O)O
InChI InChI=1S/C35H54O13/c1-15-25(38)26(39)28(41)32(45-15)48-30-16(2)46-31(29(42)27(30)40)47-19-7-9-33(3)18(12-19)5-6-21-24(33)22(36)13-34(4)20(8-10-35(21,34)43)17-11-23(37)44-14-17/h11,15-16,18-22,24-32,36,38-43H,5-10,12-14H2,1-4H3/t15-,16-,18+,19-,20+,21+,22+,24+,25-,26+,27-,28+,29+,30-,31-,32-,33-,34+,35-/m0/s1
InChI Key JKJVDVVASXIAMQ-SWIBRNOXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C35H54O13
Molecular Weight 682.80 g/mol
Exact Mass 682.35644177 g/mol
Topological Polar Surface Area (TPSA) 205.00 Ų
XlogP -0.20
Atomic LogP (AlogP) 0.28
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(3S,5R,8R,9S,10S,11R,13R,14S,17R)-3-[(2R,3R,4S,5R,6S)-3,4-dihydroxy-6-methyl-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-11,14-dihydroxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9219 92.19%
Caco-2 - 0.8840 88.40%
Blood Brain Barrier - 0.9000 90.00%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.8297 82.97%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9436 94.36%
OATP1B3 inhibitior + 0.9518 95.18%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.5055 50.55%
P-glycoprotein inhibitior + 0.6818 68.18%
P-glycoprotein substrate + 0.6705 67.05%
CYP3A4 substrate + 0.7174 71.74%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9026 90.26%
CYP3A4 inhibition - 0.9279 92.79%
CYP2C9 inhibition - 0.9196 91.96%
CYP2C19 inhibition - 0.9385 93.85%
CYP2D6 inhibition - 0.9359 93.59%
CYP1A2 inhibition - 0.9261 92.61%
CYP2C8 inhibition - 0.6951 69.51%
CYP inhibitory promiscuity - 0.9279 92.79%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5632 56.32%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9271 92.71%
Skin irritation + 0.5359 53.59%
Skin corrosion - 0.9388 93.88%
Ames mutagenesis - 0.6770 67.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7658 76.58%
Micronuclear - 0.8300 83.00%
Hepatotoxicity - 0.8018 80.18%
skin sensitisation - 0.9042 90.42%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.7149 71.49%
Acute Oral Toxicity (c) I 0.7867 78.67%
Estrogen receptor binding + 0.7769 77.69%
Androgen receptor binding + 0.8146 81.46%
Thyroid receptor binding - 0.7013 70.13%
Glucocorticoid receptor binding + 0.6071 60.71%
Aromatase binding + 0.7163 71.63%
PPAR gamma + 0.6893 68.93%
Honey bee toxicity - 0.6464 64.64%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.6000 60.00%
Fish aquatic toxicity + 0.9750 97.50%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.72% 91.11%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 96.93% 96.77%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.34% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 96.23% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.73% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.58% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.00% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.72% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.98% 92.94%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 90.97% 81.11%
CHEMBL3714130 P46095 G-protein coupled receptor 6 90.75% 97.36%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.28% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.28% 95.56%
CHEMBL3038469 P24941 CDK2/Cyclin A 88.88% 91.38%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.83% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.65% 94.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.25% 82.69%
CHEMBL2581 P07339 Cathepsin D 82.13% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 81.48% 95.93%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.17% 99.23%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.60% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ornithogalum nutans

Cross-Links

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PubChem 163036130
LOTUS LTS0108976
wikiData Q105130282