4-O-(Glucopyranosyl)-epsilon-rhodomycinone

Details

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Internal ID cacc9552-1425-4d13-8f1b-8ca086c5de0a
Taxonomy Phenylpropanoids and polyketides > Anthracyclines
IUPAC Name methyl 2-ethyl-2,5,7,12-tetrahydroxy-6,11-dioxo-4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-1H-tetracene-1-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H30O14/c1-3-28(39)7-11(41-27-25(37)24(36)20(32)12(8-29)42-27)14-15(18(28)26(38)40-2)23(35)16-17(22(14)34)21(33)13-9(19(16)31)5-4-6-10(13)30/h4-6,11-12,18,20,24-25,27,29-30,32,34-37,39H,3,7-8H2,1-2H3
InChI Key BUROQAOCKUYUEW-UHFFFAOYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C28H30O14
Molecular Weight 590.50 g/mol
Exact Mass 590.16355563 g/mol
Topological Polar Surface Area (TPSA) 241.00 Ų
XlogP 1.10
Atomic LogP (AlogP) -0.76
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 5

Synonyms

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4-Gperd
methyl 2-ethyl-4-(hexopyranosyloxy)-2,5,7,12-tetrahydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate
DTXSID10978347
4-O-(Glucopyranosyl)-epsilon-rhodomycinone
5-bromo-4-chloro-2-(methylthio)-Pyrimidine
A8777
1-Naphthaaenecarboxylic acid, 2-ethyl-4-(beta-D-glucopyranosyloxy)-1,2,3,4,6,11-hexahydro-2,5,7,12-tetrahydroxy-6,11-dioxo-, methyl ester, (1R-(1alpha,2beta,4beta))-

2D Structure

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2D Structure of 4-O-(Glucopyranosyl)-epsilon-rhodomycinone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7803 78.03%
Caco-2 - 0.8712 87.12%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.4690 46.90%
OATP2B1 inhibitior - 0.7214 72.14%
OATP1B1 inhibitior + 0.8631 86.31%
OATP1B3 inhibitior + 0.9593 95.93%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.8159 81.59%
P-glycoprotein inhibitior - 0.5233 52.33%
P-glycoprotein substrate + 0.6263 62.63%
CYP3A4 substrate + 0.6860 68.60%
CYP2C9 substrate - 0.8151 81.51%
CYP2D6 substrate - 0.8819 88.19%
CYP3A4 inhibition - 0.8013 80.13%
CYP2C9 inhibition - 0.9343 93.43%
CYP2C19 inhibition - 0.9242 92.42%
CYP2D6 inhibition - 0.9332 93.32%
CYP1A2 inhibition - 0.6829 68.29%
CYP2C8 inhibition - 0.6215 62.15%
CYP inhibitory promiscuity - 0.9291 92.91%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7191 71.91%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9167 91.67%
Skin irritation - 0.7981 79.81%
Skin corrosion - 0.9415 94.15%
Ames mutagenesis + 0.9435 94.35%
Human Ether-a-go-go-Related Gene inhibition - 0.4200 42.00%
Micronuclear - 0.5267 52.67%
Hepatotoxicity - 0.6416 64.16%
skin sensitisation - 0.9040 90.40%
Respiratory toxicity + 0.8444 84.44%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity + 0.6401 64.01%
Acute Oral Toxicity (c) III 0.6602 66.02%
Estrogen receptor binding + 0.8626 86.26%
Androgen receptor binding + 0.7177 71.77%
Thyroid receptor binding - 0.5203 52.03%
Glucocorticoid receptor binding + 0.7632 76.32%
Aromatase binding + 0.7150 71.50%
PPAR gamma + 0.7873 78.73%
Honey bee toxicity - 0.7800 78.00%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.8846 88.46%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.61% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.57% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.32% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.62% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.40% 95.56%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 91.91% 96.38%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 91.63% 99.23%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 89.33% 91.24%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.15% 94.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 89.09% 85.14%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 87.88% 96.21%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.06% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 86.91% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.97% 97.09%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.96% 96.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.49% 95.83%
CHEMBL218 P21554 Cannabinoid CB1 receptor 80.89% 96.61%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.77% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 80.53% 95.93%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 124940
LOTUS LTS0154114
wikiData Q82963700