(3R,5R)-3-hydroxy-3-[(3S,5S,8R,9R,10R,13R,14R,17S)-3-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-5-(2-methylprop-1-enyl)oxolan-2-one

Details

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Internal ID a6ab3bd6-6a9c-49e3-be00-5ab0c51bbb18
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (3R,5R)-3-hydroxy-3-[(3S,5S,8R,9R,10R,13R,14R,17S)-3-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-5-(2-methylprop-1-enyl)oxolan-2-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3CCC4(C5CCC6C(CCC6(C5(CCC4C3(C)C)C)C)C7(CC(OC7=O)C=C(C)C)O)C)CO)O)OC8C(C(C(CO8)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2O[C@H]3CC[C@@]4([C@H]5CC[C@@H]6[C@H](CC[C@]6([C@@]5(CC[C@@H]4C3(C)C)C)C)[C@@]7(C[C@@H](OC7=O)C=C(C)C)O)C)CO)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O)O)O
InChI InChI=1S/C47H76O17/c1-21(2)17-23-18-47(57,42(56)60-23)25-11-15-45(7)24(25)9-10-29-44(6)14-13-30(43(4,5)28(44)12-16-46(29,45)8)62-41-38(64-40-36(55)34(53)31(50)22(3)59-40)37(33(52)27(19-48)61-41)63-39-35(54)32(51)26(49)20-58-39/h17,22-41,48-55,57H,9-16,18-20H2,1-8H3/t22-,23-,24+,25-,26+,27+,28+,29+,30-,31-,32-,33+,34+,35+,36+,37-,38+,39-,40-,41-,44-,45+,46+,47+/m0/s1
InChI Key FYSVMXWLJSUANI-KMVQHFQESA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C47H76O17
Molecular Weight 913.10 g/mol
Exact Mass 912.50825095 g/mol
Topological Polar Surface Area (TPSA) 264.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 1.18
H-Bond Acceptor 17
H-Bond Donor 9
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3R,5R)-3-hydroxy-3-[(3S,5S,8R,9R,10R,13R,14R,17S)-3-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-5-(2-methylprop-1-enyl)oxolan-2-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8592 85.92%
Caco-2 - 0.8871 88.71%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8477 84.77%
OATP2B1 inhibitior - 0.8790 87.90%
OATP1B1 inhibitior + 0.8213 82.13%
OATP1B3 inhibitior + 0.8897 88.97%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.7781 77.81%
P-glycoprotein inhibitior + 0.7622 76.22%
P-glycoprotein substrate + 0.5402 54.02%
CYP3A4 substrate + 0.7498 74.98%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8723 87.23%
CYP3A4 inhibition - 0.8944 89.44%
CYP2C9 inhibition - 0.8559 85.59%
CYP2C19 inhibition - 0.9065 90.65%
CYP2D6 inhibition - 0.9285 92.85%
CYP1A2 inhibition - 0.9109 91.09%
CYP2C8 inhibition + 0.6568 65.68%
CYP inhibitory promiscuity - 0.9128 91.28%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5806 58.06%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9066 90.66%
Skin irritation - 0.5693 56.93%
Skin corrosion - 0.9422 94.22%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7693 76.93%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.7625 76.25%
skin sensitisation - 0.9035 90.35%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.9053 90.53%
Acute Oral Toxicity (c) I 0.7858 78.58%
Estrogen receptor binding + 0.8067 80.67%
Androgen receptor binding + 0.7480 74.80%
Thyroid receptor binding - 0.5704 57.04%
Glucocorticoid receptor binding + 0.7207 72.07%
Aromatase binding + 0.6618 66.18%
PPAR gamma + 0.7806 78.06%
Honey bee toxicity - 0.5578 55.78%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.6400 64.00%
Fish aquatic toxicity + 0.9609 96.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.13% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 93.29% 94.75%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.89% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.28% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.08% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.54% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.29% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.08% 89.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.70% 96.61%
CHEMBL2581 P07339 Cathepsin D 89.39% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 88.00% 97.36%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.84% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.62% 95.89%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.78% 97.25%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.84% 96.77%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.53% 94.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.32% 97.14%
CHEMBL226 P30542 Adenosine A1 receptor 83.38% 95.93%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.85% 93.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 82.32% 90.08%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.24% 92.88%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.23% 92.94%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.20% 100.00%
CHEMBL4105786 P41182 B-cell lymphoma 6 protein 81.87% 92.86%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.87% 91.24%
CHEMBL325 Q13547 Histone deacetylase 1 81.73% 95.92%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.22% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gynostemma pentaphyllum

Cross-Links

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PubChem 162934804
LOTUS LTS0028316
wikiData Q105004695