[3,4,5-Trihydroxy-6-[[3-[4-hydroxy-6-(hydroxymethyl)-3,5-bis[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy-17-(3-hydroxy-6-methylheptan-2-yl)-10,13-dimethyl-12-oxo-1,2,3,4,7,8,9,11,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-16-yl]oxy]oxan-2-yl]methyl acetate

Details

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Internal ID c8076761-a3b9-476d-b83b-7b58935d103f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [3,4,5-trihydroxy-6-[[3-[4-hydroxy-6-(hydroxymethyl)-3,5-bis[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy-17-(3-hydroxy-6-methylheptan-2-yl)-10,13-dimethyl-12-oxo-1,2,3,4,7,8,9,11,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-16-yl]oxy]oxan-2-yl]methyl acetate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(OC(C(C2O)OC3C(C(C(C(O3)C)O)O)O)OC4CCC5(C6CC(=O)C7(C(C6CC=C5C4)CC(C7C(C)C(CCC(C)C)O)OC8C(C(C(C(O8)COC(=O)C)O)O)O)C)C)CO)O)O)O
SMILES (Isomeric) CC1C(C(C(C(O1)OC2C(OC(C(C2O)OC3C(C(C(C(O3)C)O)O)O)OC4CCC5(C6CC(=O)C7(C(C6CC=C5C4)CC(C7C(C)C(CCC(C)C)O)OC8C(C(C(C(O8)COC(=O)C)O)O)O)C)C)CO)O)O)O
InChI InChI=1S/C53H86O23/c1-20(2)9-12-30(56)21(3)35-31(72-50-44(66)41(63)38(60)33(74-50)19-68-24(6)55)16-29-27-11-10-25-15-26(13-14-52(25,7)28(27)17-34(57)53(29,35)8)71-51-47(76-49-43(65)40(62)37(59)23(5)70-49)45(67)46(32(18-54)73-51)75-48-42(64)39(61)36(58)22(4)69-48/h10,20-23,26-33,35-51,54,56,58-67H,9,11-19H2,1-8H3
InChI Key LTDYJAJKLBEZOH-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C53H86O23
Molecular Weight 1091.20 g/mol
Exact Mass 1090.55598899 g/mol
Topological Polar Surface Area (TPSA) 360.00 Ų
XlogP -1.90
Atomic LogP (AlogP) -1.57
H-Bond Acceptor 23
H-Bond Donor 12
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [3,4,5-Trihydroxy-6-[[3-[4-hydroxy-6-(hydroxymethyl)-3,5-bis[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]oxan-2-yl]oxy-17-(3-hydroxy-6-methylheptan-2-yl)-10,13-dimethyl-12-oxo-1,2,3,4,7,8,9,11,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-16-yl]oxy]oxan-2-yl]methyl acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8033 80.33%
Caco-2 - 0.8775 87.75%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.8646 86.46%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8557 85.57%
OATP1B3 inhibitior - 0.2602 26.02%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.5526 55.26%
BSEP inhibitior + 0.9442 94.42%
P-glycoprotein inhibitior + 0.7446 74.46%
P-glycoprotein substrate + 0.6612 66.12%
CYP3A4 substrate + 0.7379 73.79%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8833 88.33%
CYP3A4 inhibition - 0.8747 87.47%
CYP2C9 inhibition - 0.8578 85.78%
CYP2C19 inhibition - 0.9333 93.33%
CYP2D6 inhibition - 0.9482 94.82%
CYP1A2 inhibition - 0.9200 92.00%
CYP2C8 inhibition + 0.7081 70.81%
CYP inhibitory promiscuity - 0.9612 96.12%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5789 57.89%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9035 90.35%
Skin irritation - 0.5158 51.58%
Skin corrosion - 0.9393 93.93%
Ames mutagenesis - 0.8428 84.28%
Human Ether-a-go-go-Related Gene inhibition + 0.7825 78.25%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.7125 71.25%
skin sensitisation - 0.9124 91.24%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.9003 90.03%
Acute Oral Toxicity (c) III 0.7092 70.92%
Estrogen receptor binding + 0.8623 86.23%
Androgen receptor binding + 0.7273 72.73%
Thyroid receptor binding + 0.5933 59.33%
Glucocorticoid receptor binding + 0.7976 79.76%
Aromatase binding + 0.6494 64.94%
PPAR gamma + 0.8222 82.22%
Honey bee toxicity - 0.6433 64.33%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9631 96.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.25% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.10% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.45% 97.25%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.71% 85.14%
CHEMBL226 P30542 Adenosine A1 receptor 97.59% 95.93%
CHEMBL2581 P07339 Cathepsin D 96.83% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.33% 97.09%
CHEMBL1937 Q92769 Histone deacetylase 2 93.97% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.47% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.95% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.16% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.63% 100.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 88.15% 90.08%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.73% 93.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.60% 94.45%
CHEMBL4227 P25090 Lipoxin A4 receptor 86.89% 100.00%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 86.20% 97.33%
CHEMBL3401 O75469 Pregnane X receptor 85.45% 94.73%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 83.47% 89.67%
CHEMBL5255 O00206 Toll-like receptor 4 83.04% 92.50%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.99% 91.24%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.98% 97.36%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 81.66% 97.29%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.54% 96.90%
CHEMBL255 P29275 Adenosine A2b receptor 81.46% 98.59%
CHEMBL332 P03956 Matrix metalloproteinase-1 81.41% 94.50%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.63% 93.04%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.04% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea spongiosa

Cross-Links

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PubChem 75964124
LOTUS LTS0257777
wikiData Q105156906