(2S,3R,4S,5S)-2-[(1R,2S,3R,4S,6R)-4-amino-3-[(2S,3R,6R)-3-amino-6-[(1S)-1-aminoethyl]oxan-2-yl]oxy-2,6-dihydroxycyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol

Details

Top
Internal ID 9e12504a-0316-43e8-8307-476c1e3e9be2
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides > Aminocyclitol glycosides
IUPAC Name (2S,3R,4S,5S)-2-[(1R,2S,3R,4S,6R)-4-amino-3-[(2S,3R,6R)-3-amino-6-[(1S)-1-aminoethyl]oxan-2-yl]oxy-2,6-dihydroxycyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H40N4O8/c1-8(21)12-5-4-9(22)18(30-12)31-15-10(23)6-11(25)16(13(15)26)32-19-14(27)17(24-3)20(2,28)7-29-19/h8-19,24-28H,4-7,21-23H2,1-3H3/t8-,9+,10-,11+,12+,13-,14+,15+,16+,17-,18-,19-,20+/m0/s1
InChI Key DFRLTZLTFDGGST-PIDSZKQBSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C20H40N4O8
Molecular Weight 464.60 g/mol
Exact Mass 464.28461425 g/mol
Topological Polar Surface Area (TPSA) 208.00 Ų
XlogP -4.40
Atomic LogP (AlogP) -3.55
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4S,5S)-2-[(1R,2S,3R,4S,6R)-4-amino-3-[(2S,3R,6R)-3-amino-6-[(1S)-1-aminoethyl]oxan-2-yl]oxy-2,6-dihydroxycyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9604 96.04%
Caco-2 - 0.8466 84.66%
Blood Brain Barrier - 0.9750 97.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Lysosomes 0.6167 61.67%
OATP2B1 inhibitior - 0.8620 86.20%
OATP1B1 inhibitior + 0.9324 93.24%
OATP1B3 inhibitior + 0.9397 93.97%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9263 92.63%
P-glycoprotein inhibitior - 0.8087 80.87%
P-glycoprotein substrate - 0.7619 76.19%
CYP3A4 substrate + 0.6788 67.88%
CYP2C9 substrate - 0.8000 80.00%
CYP2D6 substrate - 0.6940 69.40%
CYP3A4 inhibition - 0.9632 96.32%
CYP2C9 inhibition - 0.8994 89.94%
CYP2C19 inhibition - 0.9127 91.27%
CYP2D6 inhibition - 0.9253 92.53%
CYP1A2 inhibition - 0.9116 91.16%
CYP2C8 inhibition - 0.6183 61.83%
CYP inhibitory promiscuity - 0.9407 94.07%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5934 59.34%
Eye corrosion - 0.9848 98.48%
Eye irritation - 0.9704 97.04%
Skin irritation - 0.7676 76.76%
Skin corrosion - 0.9081 90.81%
Ames mutagenesis - 0.6165 61.65%
Human Ether-a-go-go-Related Gene inhibition - 0.3976 39.76%
Micronuclear + 0.6900 69.00%
Hepatotoxicity + 0.5520 55.20%
skin sensitisation - 0.8454 84.54%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity + 0.6646 66.46%
Acute Oral Toxicity (c) III 0.5862 58.62%
Estrogen receptor binding - 0.5896 58.96%
Androgen receptor binding + 0.5544 55.44%
Thyroid receptor binding - 0.6137 61.37%
Glucocorticoid receptor binding + 0.7270 72.70%
Aromatase binding + 0.6839 68.39%
PPAR gamma + 0.6453 64.53%
Honey bee toxicity - 0.8052 80.52%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity - 0.8897 88.97%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.78% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.35% 96.09%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 96.80% 95.58%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.73% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 96.24% 95.93%
CHEMBL284 P27487 Dipeptidyl peptidase IV 96.02% 95.69%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 93.90% 91.03%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 93.19% 96.77%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.72% 94.45%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 91.65% 96.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 91.41% 95.89%
CHEMBL204 P00734 Thrombin 90.63% 96.01%
CHEMBL2179 P04062 Beta-glucocerebrosidase 88.25% 85.31%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 87.81% 95.71%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 87.81% 82.69%
CHEMBL3437 Q16853 Amine oxidase, copper containing 86.90% 94.00%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 86.08% 97.47%
CHEMBL1974 P36888 Tyrosine-protein kinase receptor FLT3 86.01% 91.83%
CHEMBL2413 P32246 C-C chemokine receptor type 1 85.97% 89.50%
CHEMBL2243 O00519 Anandamide amidohydrolase 85.70% 97.53%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.68% 97.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.11% 95.89%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 84.64% 92.88%
CHEMBL4581 P52732 Kinesin-like protein 1 84.46% 93.18%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.25% 100.00%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 84.13% 98.75%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 84.09% 97.31%
CHEMBL4630 O14757 Serine/threonine-protein kinase Chk1 82.62% 97.03%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 82.20% 95.71%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.50% 96.21%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.45% 91.07%
CHEMBL340 P08684 Cytochrome P450 3A4 80.43% 91.19%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 80.20% 96.47%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 80.20% 92.86%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 163088706
LOTUS LTS0120922
wikiData Q104978242