(2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-2-[(1R,2S,4S,5'S,6R,7S,8S,9S,12S,13S,16S,18R)-8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID e2e8710c-911d-40aa-b255-f52107e78f54
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-2-[(1R,2S,4S,5'S,6R,7S,8S,9S,12S,13S,16S,18R)-8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3(C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(CO8)O)O)O)O)OC9C(C(C(C(O9)CO)O)O)O)C)C)O)C)OC1
SMILES (Isomeric) C[C@H]1CC[C@@]2([C@H]([C@]3([C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC[C@H]6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)C)C)O)C)OC1
InChI InChI=1S/C44H72O18/c1-19-7-12-43(56-17-19)20(2)44(54)29(62-43)14-25-23-6-5-21-13-22(8-10-41(21,3)24(23)9-11-42(25,44)4)57-40-37(61-39-34(52)32(50)31(49)27(15-45)58-39)35(53)36(28(16-46)59-40)60-38-33(51)30(48)26(47)18-55-38/h19-40,45-54H,5-18H2,1-4H3/t19-,20+,21+,22-,23+,24-,25-,26+,27+,28+,29-,30-,31+,32-,33+,34+,35-,36+,37+,38-,39-,40+,41-,42-,43+,44+/m0/s1
InChI Key RWDAVSSDOVKEBP-RHQAOWEXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C44H72O18
Molecular Weight 889.00 g/mol
Exact Mass 888.47186544 g/mol
Topological Polar Surface Area (TPSA) 276.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.98
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S,6R)-2-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-2-[(1R,2S,4S,5'S,6R,7S,8S,9S,12S,13S,16S,18R)-8-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5246 52.46%
Caco-2 - 0.8867 88.67%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6174 61.74%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8463 84.63%
OATP1B3 inhibitior + 0.9480 94.80%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior + 0.6115 61.15%
P-glycoprotein inhibitior + 0.7238 72.38%
P-glycoprotein substrate + 0.5259 52.59%
CYP3A4 substrate + 0.7537 75.37%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8301 83.01%
CYP3A4 inhibition - 0.9473 94.73%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.8997 89.97%
CYP2D6 inhibition - 0.9561 95.61%
CYP1A2 inhibition - 0.9215 92.15%
CYP2C8 inhibition + 0.6922 69.22%
CYP inhibitory promiscuity - 0.9616 96.16%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6223 62.23%
Eye corrosion - 0.9917 99.17%
Eye irritation - 0.9112 91.12%
Skin irritation - 0.6555 65.55%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.6554 65.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7246 72.46%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.9420 94.20%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.8930 89.30%
Acute Oral Toxicity (c) I 0.8185 81.85%
Estrogen receptor binding + 0.8110 81.10%
Androgen receptor binding + 0.7600 76.00%
Thyroid receptor binding - 0.5933 59.33%
Glucocorticoid receptor binding - 0.4946 49.46%
Aromatase binding + 0.6654 66.54%
PPAR gamma + 0.7139 71.39%
Honey bee toxicity - 0.5583 55.83%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.7523 75.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.77% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.12% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.05% 91.11%
CHEMBL233 P35372 Mu opioid receptor 96.78% 97.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.04% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 94.86% 95.93%
CHEMBL218 P21554 Cannabinoid CB1 receptor 94.69% 96.61%
CHEMBL325 Q13547 Histone deacetylase 1 93.98% 95.92%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.98% 100.00%
CHEMBL237 P41145 Kappa opioid receptor 91.46% 98.10%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 91.45% 95.58%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 90.24% 95.50%
CHEMBL2243 O00519 Anandamide amidohydrolase 89.99% 97.53%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.48% 94.45%
CHEMBL4302 P08183 P-glycoprotein 1 89.25% 92.98%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 88.70% 96.21%
CHEMBL5255 O00206 Toll-like receptor 4 88.34% 92.50%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 87.93% 97.50%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 87.80% 97.86%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 87.24% 89.05%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 87.21% 97.31%
CHEMBL3922 P50579 Methionine aminopeptidase 2 86.78% 97.28%
CHEMBL1914 P06276 Butyrylcholinesterase 86.11% 95.00%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 85.50% 91.71%
CHEMBL2996 Q05655 Protein kinase C delta 83.89% 97.79%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.50% 92.94%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.17% 96.95%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 82.76% 95.36%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.46% 95.89%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 81.44% 99.17%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 81.08% 97.29%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 81.03% 100.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.48% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asparagus acutifolius

Cross-Links

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PubChem 24179566
LOTUS LTS0159063
wikiData Q105246450