methyl (4S,5E,6S)-4-[2-[[(1S,2R,3R,5R)-5-[1,3-bis[[2-[(2S,3E,4S)-3-ethylidene-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-4-yl]acetyl]oxy]propan-2-yl]-3-hydroxy-2-methylcyclopentyl]methoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

Details

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Internal ID 0a6b9ee5-eb8a-43b7-b2d8-fbba45df4846
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Hexacarboxylic acids and derivatives
IUPAC Name methyl (4S,5E,6S)-4-[2-[[(1S,2R,3R,5R)-5-[1,3-bis[[2-[(2S,3E,4S)-3-ethylidene-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-4-yl]acetyl]oxy]propan-2-yl]-3-hydroxy-2-methylcyclopentyl]methoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate
SMILES (Canonical) CC=C1C(C(=COC1OC2C(C(C(C(O2)CO)O)O)O)C(=O)OC)CC(=O)OCC3C(C(CC3C(COC(=O)CC4C(=COC(C4=CC)OC5C(C(C(C(O5)CO)O)O)O)C(=O)OC)COC(=O)CC6C(=COC(C6=CC)OC7C(C(C(C(O7)CO)O)O)O)C(=O)OC)O)C
SMILES (Isomeric) C/C=C\1/[C@@H](OC=C([C@H]1CC(=O)OC[C@H]2[C@@H](C[C@H]([C@@H]2C)O)C(COC(=O)C[C@H]3/C(=C\C)/[C@@H](OC=C3C(=O)OC)O[C@@H]4O[C@@H]([C@H]([C@@H]([C@H]4O)O)O)CO)COC(=O)C[C@H]5/C(=C\C)/[C@@H](OC=C5C(=O)OC)O[C@@H]6O[C@@H]([C@H]([C@@H]([C@H]6O)O)O)CO)C(=O)OC)O[C@@H]7O[C@@H]([C@H]([C@@H]([C@H]7O)O)O)CO
InChI InChI=1S/C61H86O34/c1-8-26-30(34(53(78)81-5)21-87-56(26)93-59-50(75)47(72)44(69)38(15-62)90-59)12-41(66)84-18-25(19-85-42(67)13-31-27(9-2)57(88-22-35(31)54(79)82-6)94-60-51(76)48(73)45(70)39(16-63)91-60)29-11-37(65)24(4)33(29)20-86-43(68)14-32-28(10-3)58(89-23-36(32)55(80)83-7)95-61-52(77)49(74)46(71)40(17-64)92-61/h8-10,21-25,29-33,37-40,44-52,56-65,69-77H,11-20H2,1-7H3/b26-8+,27-9+,28-10+/t24-,29+,30+,31+,32+,33-,37-,38-,39-,40-,44-,45-,46-,47+,48+,49+,50-,51-,52-,56+,57+,58+,59+,60+,61+/m1/s1
InChI Key ISPNVFXVQQJBJP-ZIYITBGCSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C61H86O34
Molecular Weight 1363.30 g/mol
Exact Mass 1362.5000498 g/mol
Topological Polar Surface Area (TPSA) 504.00 Ų
XlogP -4.50
Atomic LogP (AlogP) -4.59
H-Bond Acceptor 34
H-Bond Donor 13
Rotatable Bonds 25

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (4S,5E,6S)-4-[2-[[(1S,2R,3R,5R)-5-[1,3-bis[[2-[(2S,3E,4S)-3-ethylidene-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-4-yl]acetyl]oxy]propan-2-yl]-3-hydroxy-2-methylcyclopentyl]methoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6606 66.06%
Caco-2 - 0.8598 85.98%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7657 76.57%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.6985 69.85%
OATP1B3 inhibitior + 0.9430 94.30%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9653 96.53%
P-glycoprotein inhibitior + 0.7448 74.48%
P-glycoprotein substrate + 0.6299 62.99%
CYP3A4 substrate + 0.6817 68.17%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8894 88.94%
CYP3A4 inhibition - 0.8738 87.38%
CYP2C9 inhibition - 0.9172 91.72%
CYP2C19 inhibition - 0.8969 89.69%
CYP2D6 inhibition - 0.9197 91.97%
CYP1A2 inhibition - 0.9133 91.33%
CYP2C8 inhibition + 0.6049 60.49%
CYP inhibitory promiscuity - 0.9617 96.17%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7408 74.08%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.8973 89.73%
Skin irritation - 0.7558 75.58%
Skin corrosion - 0.9564 95.64%
Ames mutagenesis + 0.5446 54.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7599 75.99%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.7176 71.76%
skin sensitisation - 0.8963 89.63%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity + 0.6500 65.00%
Nephrotoxicity - 0.7750 77.50%
Acute Oral Toxicity (c) III 0.5140 51.40%
Estrogen receptor binding + 0.7538 75.38%
Androgen receptor binding + 0.7185 71.85%
Thyroid receptor binding + 0.6494 64.94%
Glucocorticoid receptor binding + 0.7715 77.15%
Aromatase binding + 0.5649 56.49%
PPAR gamma + 0.8037 80.37%
Honey bee toxicity - 0.7202 72.02%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.8439 84.39%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.24% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.40% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 93.97% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.08% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 90.82% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.47% 97.09%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 88.83% 95.83%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 88.62% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.01% 99.17%
CHEMBL340 P08684 Cytochrome P450 3A4 86.66% 91.19%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.65% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.22% 86.33%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.02% 86.92%
CHEMBL2581 P07339 Cathepsin D 84.23% 98.95%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 83.97% 94.80%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 83.39% 95.64%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 83.09% 85.14%
CHEMBL5255 O00206 Toll-like receptor 4 81.54% 92.50%
CHEMBL5028 O14672 ADAM10 81.49% 97.50%
CHEMBL2996 Q05655 Protein kinase C delta 81.44% 97.79%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.77% 96.90%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.20% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Jasminum sambac

Cross-Links

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PubChem 162953336
LOTUS LTS0243021
wikiData Q105119698