(4aS,6aR,6aS,6bR,8aR,9R,10R,11S,12aS)-11-hydroxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-10-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12-dodecahydropicene-4a-carboxylic acid

Details

Top
Internal ID 4fcf2888-8fbc-4019-8afe-b45d8e3d2884
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (4aS,6aR,6aS,6bR,8aR,9R,10R,11S,12aS)-11-hydroxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-10-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12-dodecahydropicene-4a-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C36H56O10/c1-31(2)11-13-36(30(43)44)14-12-34(5)19(20(36)15-31)7-8-24-32(3)16-21(39)28(33(4,18-38)23(32)9-10-35(24,34)6)46-29-27(42)26(41)25(40)22(17-37)45-29/h7-8,21-29,37-42H,9-18H2,1-6H3,(H,43,44)/t21-,22+,23+,24+,25+,26-,27+,28-,29-,32-,33-,34+,35+,36-/m0/s1
InChI Key BVCBYSZQXUGSOO-GEKILKBGSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C36H56O10
Molecular Weight 648.80 g/mol
Exact Mass 648.38734798 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP 3.20
Atomic LogP (AlogP) 2.92
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 5

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (4aS,6aR,6aS,6bR,8aR,9R,10R,11S,12aS)-11-hydroxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-10-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12-dodecahydropicene-4a-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8280 82.80%
Caco-2 - 0.8439 84.39%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.8569 85.69%
OATP2B1 inhibitior - 0.5848 58.48%
OATP1B1 inhibitior + 0.8400 84.00%
OATP1B3 inhibitior - 0.5000 50.00%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6526 65.26%
BSEP inhibitior - 0.4651 46.51%
P-glycoprotein inhibitior + 0.6923 69.23%
P-glycoprotein substrate - 0.6189 61.89%
CYP3A4 substrate + 0.7070 70.70%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8829 88.29%
CYP3A4 inhibition - 0.8968 89.68%
CYP2C9 inhibition - 0.8549 85.49%
CYP2C19 inhibition - 0.8686 86.86%
CYP2D6 inhibition - 0.9356 93.56%
CYP1A2 inhibition - 0.8265 82.65%
CYP2C8 inhibition + 0.5922 59.22%
CYP inhibitory promiscuity - 0.9540 95.40%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6921 69.21%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.9248 92.48%
Skin irritation - 0.6263 62.63%
Skin corrosion - 0.9494 94.94%
Ames mutagenesis - 0.7870 78.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7181 71.81%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.6392 63.92%
skin sensitisation - 0.8865 88.65%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity + 0.7111 71.11%
Acute Oral Toxicity (c) III 0.8000 80.00%
Estrogen receptor binding + 0.6994 69.94%
Androgen receptor binding + 0.7407 74.07%
Thyroid receptor binding - 0.5268 52.68%
Glucocorticoid receptor binding + 0.5769 57.69%
Aromatase binding + 0.6453 64.53%
PPAR gamma + 0.6541 65.41%
Honey bee toxicity - 0.7897 78.97%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.7050 70.50%
Fish aquatic toxicity + 0.9499 94.99%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.93% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.14% 96.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 94.36% 97.36%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.99% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.01% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.38% 95.56%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 88.84% 91.07%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.93% 97.25%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.19% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.67% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.65% 100.00%
CHEMBL2581 P07339 Cathepsin D 82.93% 98.95%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.72% 95.50%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.14% 93.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Polygala japonica

Cross-Links

Top
PubChem 10794303
LOTUS LTS0140549
wikiData Q104946449