(23S,25R)-12alpha,14alpha,17alpha,23-tetrahydroxyspirost-5-en-3beta-yl O-alpha-L-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside

Details

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Internal ID a50e18bc-2e34-4c11-a919-085829f915e5
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2S,3S,5R)-2-[(2R,4S,5S)-2-[[(3S,8R,9S,10R,12S,13S,14R,16S)-17-ethyl-12,14,17-trihydroxy-16-[(2S,5R)-3-hydroxy-2,5-dimethyloxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,15,16-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CCC1(C(CC2(C1(C(CC3C2CC=C4C3(CCC(C4)OC5C(C(C(C(O5)CO)O)O)OC6C(C(C(C(O6)C)O)O)O)C)O)C)O)OC7(C(CC(CO7)C)O)C)O
SMILES (Isomeric) CCC1([C@H](C[C@@]2([C@@]1([C@H](C[C@H]3[C@H]2CC=C4[C@@]3(CC[C@@H](C4)O[C@H]5C([C@H]([C@@H](C(O5)CO)O)O)O[C@H]6[C@H](C([C@H](C(O6)C)O)O)O)C)O)C)O)O[C@]7(C(C[C@H](CO7)C)O)C)O
InChI InChI=1S/C40H66O16/c1-7-39(49)27(56-38(6)26(43)12-18(2)17-51-38)15-40(50)22-9-8-20-13-21(10-11-36(20,4)23(22)14-25(42)37(39,40)5)53-35-33(31(47)29(45)24(16-41)54-35)55-34-32(48)30(46)28(44)19(3)52-34/h8,18-19,21-35,41-50H,7,9-17H2,1-6H3/t18-,19?,21+,22-,23+,24?,25+,26?,27+,28+,29-,30?,31+,32+,33?,34+,35-,36+,37-,38+,39?,40-/m1/s1
InChI Key RRUWLJUVMATISD-PNSAIWQGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C40H66O16
Molecular Weight 802.90 g/mol
Exact Mass 802.43508601 g/mol
Topological Polar Surface Area (TPSA) 258.00 Ų
XlogP -0.80
Atomic LogP (AlogP) -0.66
H-Bond Acceptor 16
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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CHEBI:184815
LMST01080062
(2S,3S,5R)-2-[(2R,4S,5S)-2-[[(3S,8R,9S,10R,12S,13S,14R,16S)-17-ethyl-12,14,17-trihydroxy-16-[(2S,5R)-3-hydroxy-2,5-dimethyloxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,15,16-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol

2D Structure

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2D Structure of (23S,25R)-12alpha,14alpha,17alpha,23-tetrahydroxyspirost-5-en-3beta-yl O-alpha-L-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8065 80.65%
Caco-2 - 0.8840 88.40%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.6465 64.65%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8549 85.49%
OATP1B3 inhibitior + 0.8559 85.59%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.7296 72.96%
P-glycoprotein inhibitior + 0.7343 73.43%
P-glycoprotein substrate + 0.6706 67.06%
CYP3A4 substrate + 0.7293 72.93%
CYP2C9 substrate - 0.7890 78.90%
CYP2D6 substrate - 0.8406 84.06%
CYP3A4 inhibition - 0.8798 87.98%
CYP2C9 inhibition - 0.9078 90.78%
CYP2C19 inhibition - 0.9020 90.20%
CYP2D6 inhibition - 0.9334 93.34%
CYP1A2 inhibition - 0.9194 91.94%
CYP2C8 inhibition + 0.7508 75.08%
CYP inhibitory promiscuity - 0.9112 91.12%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5898 58.98%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.9122 91.22%
Skin irritation + 0.5000 50.00%
Skin corrosion - 0.9443 94.43%
Ames mutagenesis - 0.7800 78.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7477 74.77%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.8000 80.00%
skin sensitisation - 0.9207 92.07%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.7343 73.43%
Acute Oral Toxicity (c) III 0.4862 48.62%
Estrogen receptor binding + 0.8029 80.29%
Androgen receptor binding + 0.7681 76.81%
Thyroid receptor binding - 0.5482 54.82%
Glucocorticoid receptor binding + 0.5738 57.38%
Aromatase binding + 0.6656 66.56%
PPAR gamma + 0.7392 73.92%
Honey bee toxicity - 0.6392 63.92%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.9320 93.20%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL226 P30542 Adenosine A1 receptor 98.83% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.72% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.56% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.08% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.12% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.60% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.56% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.12% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.06% 92.94%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.38% 95.89%
CHEMBL1937 Q92769 Histone deacetylase 2 86.36% 94.75%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.30% 92.62%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.28% 93.04%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.75% 95.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.72% 94.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.35% 95.89%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 85.27% 89.05%
CHEMBL5255 O00206 Toll-like receptor 4 82.84% 92.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.01% 93.56%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.98% 100.00%
CHEMBL2581 P07339 Cathepsin D 81.09% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.58% 97.36%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.46% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea polygonoides

Cross-Links

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PubChem 52931458
LOTUS LTS0044208
wikiData Q105244368