3-Carboxy-1-((2R,3R,4S,5R)-3,4-Dihydroxy-5-Hydroxymethyl-Tetrahydro-Furan-2-Yl)-Pyridinium

Details

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Internal ID 8242ecef-942d-4268-a7fa-c2d0da9bac34
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Glycosylamines
IUPAC Name 1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyridin-1-ium-3-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C11H13NO6/c13-5-7-8(14)9(15)10(18-7)12-3-1-2-6(4-12)11(16)17/h1-4,7-10,13-15H,5H2/p+1/t7-,8-,9-,10-/m1/s1
InChI Key PUEDDPCUCPRQNY-ZYUZMQFOSA-O
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C11H14NO6+
Molecular Weight 256.23 g/mol
Exact Mass 256.08211217 g/mol
Topological Polar Surface Area (TPSA) 111.00 Ų
XlogP -1.10
Atomic LogP (AlogP) -1.72
H-Bond Acceptor 5
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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CHEBI:27748
ribosylnicotinate
nicotinic acid ribose
C05841
CHEMBL396943
SCHEMBL18090711
3-carboxy-1-(D-ribofuranosyl)pyridinium
1-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]pyridin-1-ium-3-carboxylic acid
Q27103299

2D Structure

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2D Structure of 3-Carboxy-1-((2R,3R,4S,5R)-3,4-Dihydroxy-5-Hydroxymethyl-Tetrahydro-Furan-2-Yl)-Pyridinium

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9711 97.11%
Caco-2 - 0.8956 89.56%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.3723 37.23%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8846 88.46%
OATP1B3 inhibitior + 0.9415 94.15%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.9651 96.51%
P-glycoprotein inhibitior - 0.9505 95.05%
P-glycoprotein substrate - 0.9582 95.82%
CYP3A4 substrate - 0.6236 62.36%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8849 88.49%
CYP3A4 inhibition - 0.9932 99.32%
CYP2C9 inhibition - 0.9360 93.60%
CYP2C19 inhibition - 0.9239 92.39%
CYP2D6 inhibition - 0.9321 93.21%
CYP1A2 inhibition - 0.8688 86.88%
CYP2C8 inhibition - 0.8777 87.77%
CYP inhibitory promiscuity - 0.9531 95.31%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.5639 56.39%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.8317 83.17%
Skin irritation - 0.7801 78.01%
Skin corrosion - 0.9398 93.98%
Ames mutagenesis - 0.6923 69.23%
Human Ether-a-go-go-Related Gene inhibition - 0.8153 81.53%
Micronuclear + 0.8800 88.00%
Hepatotoxicity - 0.7090 70.90%
skin sensitisation - 0.8617 86.17%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.5666 56.66%
Acute Oral Toxicity (c) III 0.5056 50.56%
Estrogen receptor binding - 0.8197 81.97%
Androgen receptor binding - 0.6819 68.19%
Thyroid receptor binding - 0.7408 74.08%
Glucocorticoid receptor binding - 0.7347 73.47%
Aromatase binding - 0.7038 70.38%
PPAR gamma + 0.7255 72.55%
Honey bee toxicity - 0.9187 91.87%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity - 0.8892 88.92%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.50% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 87.19% 94.73%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 87.13% 87.67%
CHEMBL2581 P07339 Cathepsin D 85.51% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.53% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.26% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arabidopsis thaliana

Cross-Links

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PubChem 161234
LOTUS LTS0264435
wikiData Q27103299