D-Ribose 5-phosphate

Details

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Internal ID c23aed97-f241-4094-82af-4c6a0117b8ad
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Monosaccharides > Pentoses > Pentose phosphates
IUPAC Name [(2R,3S,4R)-3,4,5-trihydroxyoxolan-2-yl]methyl dihydrogen phosphate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5?/m1/s1
InChI Key KTVPXOYAKDPRHY-SOOFDHNKSA-N
Popularity 23 references in papers

Physical and Chemical Properties

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Molecular Formula C5H11O8P
Molecular Weight 230.11 g/mol
Exact Mass 230.01915430 g/mol
Topological Polar Surface Area (TPSA) 137.00 Ų
XlogP -3.60
Atomic LogP (AlogP) -2.47
H-Bond Acceptor 6
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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93-87-8
bmse000204
d-ribofuranose 5-O-phosphate
SCHEMBL708955
CHEBI:52742
DTXSID101273647
D-ribofuranose 5-(dihydrogen phosphate)
C00117
Q27123582
{[(2R,3S,4R)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acid
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of D-Ribose 5-phosphate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9323 93.23%
Caco-2 - 0.9453 94.53%
Blood Brain Barrier + 0.9250 92.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.7322 73.22%
OATP2B1 inhibitior - 0.8578 85.78%
OATP1B1 inhibitior + 0.9207 92.07%
OATP1B3 inhibitior + 0.9417 94.17%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.9687 96.87%
P-glycoprotein inhibitior - 0.9518 95.18%
P-glycoprotein substrate - 0.9890 98.90%
CYP3A4 substrate - 0.5636 56.36%
CYP2C9 substrate - 0.8020 80.20%
CYP2D6 substrate - 0.8459 84.59%
CYP3A4 inhibition - 0.9687 96.87%
CYP2C9 inhibition - 0.8851 88.51%
CYP2C19 inhibition - 0.8715 87.15%
CYP2D6 inhibition - 0.9169 91.69%
CYP1A2 inhibition - 0.8839 88.39%
CYP2C8 inhibition - 0.9724 97.24%
CYP inhibitory promiscuity - 0.9471 94.71%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.5518 55.18%
Eye corrosion - 0.9486 94.86%
Eye irritation - 0.9535 95.35%
Skin irritation - 0.7510 75.10%
Skin corrosion - 0.7964 79.64%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5941 59.41%
Micronuclear - 0.5000 50.00%
Hepatotoxicity - 0.5332 53.32%
skin sensitisation - 0.8639 86.39%
Respiratory toxicity - 0.5889 58.89%
Reproductive toxicity - 0.5889 58.89%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity + 0.4743 47.43%
Acute Oral Toxicity (c) III 0.5366 53.66%
Estrogen receptor binding - 0.7288 72.88%
Androgen receptor binding - 0.7299 72.99%
Thyroid receptor binding - 0.5434 54.34%
Glucocorticoid receptor binding - 0.6546 65.46%
Aromatase binding - 0.7996 79.96%
PPAR gamma - 0.7209 72.09%
Honey bee toxicity + 0.5445 54.45%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6755 67.55%
Fish aquatic toxicity - 0.5694 56.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 94.13% 94.01%
CHEMBL5957 P21589 5'-nucleotidase 91.65% 97.78%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.18% 96.09%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 90.27% 80.33%
CHEMBL3401 O75469 Pregnane X receptor 87.84% 94.73%
CHEMBL226 P30542 Adenosine A1 receptor 87.71% 95.93%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 87.55% 97.29%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.03% 86.92%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 83.33% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.03% 97.25%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 80.14% 91.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 439167
LOTUS LTS0146610
wikiData Q27123582