Cytochalasin D1

Details

Top
Internal ID e7c45149-8164-4b85-9d4c-d1e976f16119
Taxonomy Organoheterocyclic compounds > Isoindoles and derivatives > Isoindolines > Isoindolones
IUPAC Name [(1S,2R,3S,5S,6R,7S,10R,11S,12S,13R,14R,16S,18R)-7-benzyl-3,13,14,18-tetrahydroxy-5,14,16-trimethyl-4-methylidene-9,15-dioxo-19-oxa-8-azatetracyclo[10.6.1.02,10.06,10]nonadecan-11-yl] acetate
SMILES (Canonical) CC1CC(C2C3C(C(=C)C(C4C3(C(C(O2)C(C(C1=O)(C)O)O)OC(=O)C)C(=O)NC4CC5=CC=CC=C5)C)O)O
SMILES (Isomeric) C[C@H]1C[C@H]([C@@H]2[C@H]3[C@@H](C(=C)[C@H]([C@@H]4[C@@]3([C@@H]([C@@H](O2)[C@H]([C@@](C1=O)(C)O)O)OC(=O)C)C(=O)N[C@H]4CC5=CC=CC=C5)C)O)O
InChI InChI=1S/C30H39NO9/c1-13-11-19(33)23-21-22(34)15(3)14(2)20-18(12-17-9-7-6-8-10-17)31-28(37)30(20,21)27(39-16(4)32)24(40-23)26(36)29(5,38)25(13)35/h6-10,13-14,18-24,26-27,33-34,36,38H,3,11-12H2,1-2,4-5H3,(H,31,37)/t13-,14+,18-,19+,20-,21+,22+,23+,24-,26+,27+,29-,30+/m0/s1
InChI Key GMDOXJQCROTLBS-GTMPZFLVSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C30H39NO9
Molecular Weight 557.60 g/mol
Exact Mass 557.26248182 g/mol
Topological Polar Surface Area (TPSA) 163.00 Ų
XlogP 0.10
Atomic LogP (AlogP) 0.29
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of Cytochalasin D1

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8777 87.77%
Caco-2 - 0.8207 82.07%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Plasma membrane 0.6371 63.71%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8303 83.03%
OATP1B3 inhibitior + 0.9180 91.80%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.4516 45.16%
P-glycoprotein inhibitior - 0.6675 66.75%
P-glycoprotein substrate + 0.5779 57.79%
CYP3A4 substrate + 0.6952 69.52%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8466 84.66%
CYP3A4 inhibition - 0.7726 77.26%
CYP2C9 inhibition - 0.8503 85.03%
CYP2C19 inhibition - 0.8568 85.68%
CYP2D6 inhibition - 0.9471 94.71%
CYP1A2 inhibition - 0.9258 92.58%
CYP2C8 inhibition + 0.6472 64.72%
CYP inhibitory promiscuity - 0.6863 68.63%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Danger 0.5256 52.56%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9381 93.81%
Skin irritation - 0.7406 74.06%
Skin corrosion - 0.9272 92.72%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4647 46.47%
Micronuclear + 0.7900 79.00%
Hepatotoxicity + 0.5934 59.34%
skin sensitisation - 0.8252 82.52%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.6110 61.10%
Acute Oral Toxicity (c) III 0.3761 37.61%
Estrogen receptor binding + 0.6069 60.69%
Androgen receptor binding + 0.6592 65.92%
Thyroid receptor binding + 0.5176 51.76%
Glucocorticoid receptor binding + 0.6637 66.37%
Aromatase binding + 0.5736 57.36%
PPAR gamma + 0.5830 58.30%
Honey bee toxicity - 0.7334 73.34%
Biodegradation - 0.9750 97.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9084 90.84%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.01% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.93% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 97.50% 83.82%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.80% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.02% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.61% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.68% 86.33%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 93.95% 95.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.11% 95.56%
CHEMBL221 P23219 Cyclooxygenase-1 91.73% 90.17%
CHEMBL340 P08684 Cytochrome P450 3A4 87.81% 91.19%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.02% 97.09%
CHEMBL3922 P50579 Methionine aminopeptidase 2 85.15% 97.28%
CHEMBL2996 Q05655 Protein kinase C delta 84.66% 97.79%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.03% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.61% 94.00%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 82.78% 97.64%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.65% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.38% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.07% 97.14%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 146682117
LOTUS LTS0214283
wikiData Q105011705