Cylindrol B

Details

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Internal ID 63ce97f5-efe2-4a96-8d05-db6a972b9a6a
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbonyl compounds > Benzaldehydes > Hydroxybenzaldehydes
IUPAC Name 2,4-dihydroxy-6-methyl-3-[(2E,4E)-3-methyl-5-[(1R,2R,6R)-1,2,6-trimethyl-3-oxocyclohexyl]penta-2,4-dienyl]benzaldehyde
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C23H30O4/c1-14(10-11-23(5)16(3)7-9-20(25)17(23)4)6-8-18-21(26)12-15(2)19(13-24)22(18)27/h6,10-13,16-17,26-27H,7-9H2,1-5H3/b11-10+,14-6+/t16-,17+,23+/m1/s1
InChI Key AQCKKGIVKOHRLM-HBFAXEOFSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C23H30O4
Molecular Weight 370.50 g/mol
Exact Mass 370.21440943 g/mol
Topological Polar Surface Area (TPSA) 74.60 Ų
XlogP 5.60
Atomic LogP (AlogP) 4.91
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 5

Synonyms

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165187-16-6
CHEMBL4851177
2,4-dihydroxy-6-methyl-3-[(2E,4E)-3-methyl-5-[(1R,2R,6R)-1,2,6-trimethyl-3-oxocyclohexyl]penta-2,4-dienyl]benzaldehyde
SCHEMBL20819647
DTXSID501347311
BDBM50575126
AKOS040735621

2D Structure

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2D Structure of Cylindrol B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9893 98.93%
Caco-2 + 0.6853 68.53%
Blood Brain Barrier - 0.5101 51.01%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.7701 77.01%
OATP2B1 inhibitior - 0.8600 86.00%
OATP1B1 inhibitior + 0.8530 85.30%
OATP1B3 inhibitior + 0.8815 88.15%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.8291 82.91%
P-glycoprotein inhibitior - 0.4762 47.62%
P-glycoprotein substrate - 0.6647 66.47%
CYP3A4 substrate + 0.6378 63.78%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8494 84.94%
CYP3A4 inhibition - 0.6201 62.01%
CYP2C9 inhibition + 0.5698 56.98%
CYP2C19 inhibition - 0.5664 56.64%
CYP2D6 inhibition - 0.8465 84.65%
CYP1A2 inhibition + 0.6315 63.15%
CYP2C8 inhibition + 0.4692 46.92%
CYP inhibitory promiscuity - 0.5342 53.42%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8380 83.80%
Carcinogenicity (trinary) Non-required 0.6798 67.98%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9022 90.22%
Skin irritation - 0.6602 66.02%
Skin corrosion - 0.9188 91.88%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6957 69.57%
Micronuclear - 0.8000 80.00%
Hepatotoxicity + 0.5427 54.27%
skin sensitisation - 0.5295 52.95%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity - 0.6750 67.50%
Nephrotoxicity - 0.9029 90.29%
Acute Oral Toxicity (c) III 0.6441 64.41%
Estrogen receptor binding + 0.9232 92.32%
Androgen receptor binding + 0.6697 66.97%
Thyroid receptor binding + 0.8393 83.93%
Glucocorticoid receptor binding + 0.7870 78.70%
Aromatase binding + 0.7545 75.45%
PPAR gamma + 0.7991 79.91%
Honey bee toxicity - 0.8896 88.96%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.9936 99.36%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1163101 O75460 Serine/threonine-protein kinase/endoribonuclease IRE1 97.24% 98.11%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.15% 91.11%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 96.67% 93.40%
CHEMBL1951 P21397 Monoamine oxidase A 96.38% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.85% 95.56%
CHEMBL2581 P07339 Cathepsin D 92.45% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 92.08% 92.94%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.63% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.02% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.26% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 86.14% 94.75%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.81% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.28% 97.09%
CHEMBL340 P08684 Cytochrome P450 3A4 81.46% 91.19%
CHEMBL4581 P52732 Kinesin-like protein 1 80.46% 93.18%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 9907411
LOTUS LTS0146233
wikiData Q77574236