Cylindrol A

Details

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Internal ID 30d46285-a2dd-4857-8755-47ee05d5acb6
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbonyl compounds > Benzaldehydes > Hydroxybenzaldehydes
IUPAC Name [(E,2R)-5-(3-formyl-2,6-dihydroxy-4-methylphenyl)-3-methyl-1-[(1S,2R,6R)-1,2,6-trimethyl-3-oxocyclohexyl]pent-3-en-2-yl] propanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H36O6/c1-7-24(30)32-23(13-26(6)17(4)9-11-21(28)18(26)5)15(2)8-10-19-22(29)12-16(3)20(14-27)25(19)31/h8,12,14,17-18,23,29,31H,7,9-11,13H2,1-6H3/b15-8+/t17-,18+,23-,26+/m1/s1
InChI Key VLFRJRBSRCFKPU-AXNCTASFSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C26H36O6
Molecular Weight 444.60 g/mol
Exact Mass 444.25118886 g/mol
Topological Polar Surface Area (TPSA) 101.00 Ų
XlogP 5.50
Atomic LogP (AlogP) 5.06
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 8

Synonyms

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CHEMBL318783
BDBM50059845
[(E,2R)-5-(3-formyl-2,6-dihydroxy-4-methylphenyl)-3-methyl-1-[(1S,2R,6R)-1,2,6-trimethyl-3-oxocyclohexyl]pent-3-en-2-yl] propanoate
Propionic acid (E)-(R)-4-(3-formyl-2,6-dihydroxy-4-methyl-phenyl)-2-methyl-1-((1S,2R,6R)-1,2,6-trimethyl-3-oxo-cyclohexylmethyl)-but-2-enyl ester

2D Structure

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2D Structure of Cylindrol A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9916 99.16%
Caco-2 - 0.5232 52.32%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.8843 88.43%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8114 81.14%
OATP1B3 inhibitior + 0.8164 81.64%
MATE1 inhibitior - 0.5800 58.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.9448 94.48%
P-glycoprotein inhibitior + 0.7483 74.83%
P-glycoprotein substrate + 0.5375 53.75%
CYP3A4 substrate + 0.6749 67.49%
CYP2C9 substrate - 0.5936 59.36%
CYP2D6 substrate - 0.8764 87.64%
CYP3A4 inhibition - 0.6534 65.34%
CYP2C9 inhibition - 0.5546 55.46%
CYP2C19 inhibition + 0.5412 54.12%
CYP2D6 inhibition - 0.8987 89.87%
CYP1A2 inhibition - 0.6338 63.38%
CYP2C8 inhibition + 0.6277 62.77%
CYP inhibitory promiscuity - 0.6617 66.17%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.8678 86.78%
Carcinogenicity (trinary) Non-required 0.6914 69.14%
Eye corrosion - 0.9929 99.29%
Eye irritation - 0.9059 90.59%
Skin irritation - 0.7229 72.29%
Skin corrosion - 0.9637 96.37%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3731 37.31%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.6451 64.51%
skin sensitisation - 0.7110 71.10%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.6125 61.25%
Nephrotoxicity - 0.8940 89.40%
Acute Oral Toxicity (c) III 0.4575 45.75%
Estrogen receptor binding + 0.8553 85.53%
Androgen receptor binding + 0.6264 62.64%
Thyroid receptor binding + 0.5894 58.94%
Glucocorticoid receptor binding + 0.8076 80.76%
Aromatase binding + 0.7295 72.95%
PPAR gamma + 0.7618 76.18%
Honey bee toxicity - 0.7662 76.62%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.60% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.31% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.40% 95.56%
CHEMBL1163101 O75460 Serine/threonine-protein kinase/endoribonuclease IRE1 94.16% 98.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.21% 89.00%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 91.98% 93.40%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.30% 96.09%
CHEMBL1951 P21397 Monoamine oxidase A 89.79% 91.49%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.67% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.32% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 85.59% 91.19%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.83% 97.09%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.70% 93.03%
CHEMBL233 P35372 Mu opioid receptor 82.68% 97.93%
CHEMBL2964 P36507 Dual specificity mitogen-activated protein kinase kinase 2 82.38% 80.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.23% 95.89%
CHEMBL4581 P52732 Kinesin-like protein 1 81.27% 93.18%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 81.07% 90.24%
CHEMBL1937 Q92769 Histone deacetylase 2 80.69% 94.75%
CHEMBL1929 P47989 Xanthine dehydrogenase 80.36% 96.12%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 10456134
LOTUS LTS0273076
wikiData Q77386158