Cylindrocyclophane C2

Details

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Internal ID 499a5110-45f7-44a0-a22e-f4b0fc2c3b5a
Taxonomy Benzenoids > Phenols > 1-hydroxy-4-unsubstituted benzenoids
IUPAC Name (2R,3S,8R,14S,19S)-19-butyl-8-(4,4-dichlorobutyl)-3,14-dimethyltricyclo[18.2.2.29,12]hexacosa-1(22),9,11,20,23,25-hexaene-2,10,21,24,26-pentol
SMILES (Canonical) CCCCC1CCCCC(CC2=CC(=C(C(CCCCC(C(C3=CC(=C1C(=C3)O)O)O)C)CCCC(Cl)Cl)C(=C2)O)O)C
SMILES (Isomeric) CCCC[C@H]1CCCC[C@@H](CC2=CC(=C([C@H](CCCC[C@@H]([C@H](C3=CC(=C1C(=C3)O)O)O)C)CCCC(Cl)Cl)C(=C2)O)O)C
InChI InChI=1S/C36H54Cl2O5/c1-4-5-13-26-14-8-6-11-23(2)18-25-19-29(39)34(30(40)20-25)27(16-10-17-33(37)38)15-9-7-12-24(3)36(43)28-21-31(41)35(26)32(42)22-28/h19-24,26-27,33,36,39-43H,4-18H2,1-3H3/t23-,24-,26-,27+,36+/m0/s1
InChI Key NEHSJAVXGQMVJK-JSTSWHIPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C36H54Cl2O5
Molecular Weight 637.70 g/mol
Exact Mass 636.3348302 g/mol
Topological Polar Surface Area (TPSA) 101.00 Ų
XlogP 12.00
Atomic LogP (AlogP) 10.52
H-Bond Acceptor 5
H-Bond Donor 5
Rotatable Bonds 7

Synonyms

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CHEMBL1224863
DTXSID501046735

2D Structure

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2D Structure of Cylindrocyclophane C2

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9824 98.24%
Caco-2 - 0.7881 78.81%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.7417 74.17%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8828 88.28%
OATP1B3 inhibitior + 0.8863 88.63%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.8557 85.57%
P-glycoprotein inhibitior + 0.7386 73.86%
P-glycoprotein substrate + 0.5973 59.73%
CYP3A4 substrate + 0.6172 61.72%
CYP2C9 substrate + 0.6122 61.22%
CYP2D6 substrate + 0.3477 34.77%
CYP3A4 inhibition - 0.5741 57.41%
CYP2C9 inhibition - 0.5703 57.03%
CYP2C19 inhibition - 0.5759 57.59%
CYP2D6 inhibition - 0.7752 77.52%
CYP1A2 inhibition + 0.5372 53.72%
CYP2C8 inhibition + 0.6330 63.30%
CYP inhibitory promiscuity + 0.6486 64.86%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.7184 71.84%
Carcinogenicity (trinary) Non-required 0.7366 73.66%
Eye corrosion - 0.9791 97.91%
Eye irritation - 0.9400 94.00%
Skin irritation - 0.7044 70.44%
Skin corrosion - 0.6811 68.11%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7949 79.49%
Micronuclear - 0.8600 86.00%
Hepatotoxicity + 0.5053 50.53%
skin sensitisation - 0.7100 71.00%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity - 0.5286 52.86%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.7161 71.61%
Acute Oral Toxicity (c) III 0.4563 45.63%
Estrogen receptor binding + 0.7486 74.86%
Androgen receptor binding + 0.7383 73.83%
Thyroid receptor binding + 0.5236 52.36%
Glucocorticoid receptor binding + 0.7339 73.39%
Aromatase binding + 0.5780 57.80%
PPAR gamma + 0.5481 54.81%
Honey bee toxicity - 0.9088 90.88%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.6632 66.32%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.03% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.01% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.48% 96.09%
CHEMBL3359 P21462 Formyl peptide receptor 1 92.69% 93.56%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 92.33% 97.23%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.15% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.01% 97.09%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 88.37% 90.71%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.37% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.02% 95.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.03% 95.89%
CHEMBL240 Q12809 HERG 85.00% 89.76%
CHEMBL218 P21554 Cannabinoid CB1 receptor 84.25% 96.61%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.78% 99.17%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.03% 92.88%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 81.93% 98.33%
CHEMBL4040 P28482 MAP kinase ERK2 81.87% 83.82%
CHEMBL4803 P29474 Nitric-oxide synthase, endothelial 81.78% 86.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.78% 100.00%
CHEMBL4105838 Q96GG9 DCN1-like protein 1 81.13% 95.00%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 80.29% 89.62%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.04% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Neurolaena lobata

Cross-Links

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PubChem 46939426
NPASS NPC91204
ChEMBL CHEMBL1224863
LOTUS LTS0171136
wikiData Q105177933