Cylindrocyclophane A

Details

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Internal ID 889db527-53df-4a69-b23f-6b09fe31b5be
Taxonomy Benzenoids > Phenols > 1-hydroxy-4-unsubstituted benzenoids
IUPAC Name (2R,3S,8S,13R,14S,19S)-8,19-dibutyl-3,14-dimethyltricyclo[18.2.2.29,12]hexacosa-1(22),9,11,20,23,25-hexaene-2,10,13,21,24,26-hexol
SMILES (Canonical) CCCCC1CCCCC(C(C2=CC(=C(C(CCCCC(C(C3=CC(=C1C(=C3)O)O)O)C)CCCC)C(=C2)O)O)O)C
SMILES (Isomeric) CCCC[C@H]1CCCC[C@@H]([C@H](C2=CC(=C([C@H](CCCC[C@@H]([C@H](C3=CC(=C1C(=C3)O)O)O)C)CCCC)C(=C2)O)O)O)C
InChI InChI=1S/C36H56O6/c1-5-7-15-25-17-11-9-13-23(3)36(42)28-21-31(39)34(32(40)22-28)26(16-8-6-2)18-12-10-14-24(4)35(41)27-19-29(37)33(25)30(38)20-27/h19-26,35-42H,5-18H2,1-4H3/t23-,24-,25-,26-,35+,36+/m0/s1
InChI Key JCKOOZUMKBNWSJ-WDCWCBICSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C36H56O6
Molecular Weight 584.80 g/mol
Exact Mass 584.40768950 g/mol
Topological Polar Surface Area (TPSA) 121.00 Ų
XlogP 10.20
Atomic LogP (AlogP) 9.23
H-Bond Acceptor 6
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

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CHEMBL1224866
SCHEMBL16431175
DTXSID301335544
(2R,3S,8S,13R,14S,19S)-8,19-dibutyl-3,14-dimethyltricyclo[18.2.2.29,12]hexacosa-1(22),9,11,20,23,25-hexaene-2,10,13,21,24,26-hexol

2D Structure

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2D Structure of Cylindrocyclophane A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9746 97.46%
Caco-2 - 0.7705 77.05%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.7482 74.82%
OATP2B1 inhibitior - 0.8609 86.09%
OATP1B1 inhibitior + 0.9065 90.65%
OATP1B3 inhibitior + 0.8887 88.87%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.6098 60.98%
P-glycoprotein inhibitior + 0.7070 70.70%
P-glycoprotein substrate - 0.7198 71.98%
CYP3A4 substrate - 0.5256 52.56%
CYP2C9 substrate + 0.6144 61.44%
CYP2D6 substrate + 0.3881 38.81%
CYP3A4 inhibition + 0.5420 54.20%
CYP2C9 inhibition - 0.6280 62.80%
CYP2C19 inhibition - 0.6097 60.97%
CYP2D6 inhibition - 0.7665 76.65%
CYP1A2 inhibition + 0.6716 67.16%
CYP2C8 inhibition + 0.5000 50.00%
CYP inhibitory promiscuity + 0.5855 58.55%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.7634 76.34%
Carcinogenicity (trinary) Non-required 0.7344 73.44%
Eye corrosion - 0.9808 98.08%
Eye irritation - 0.9116 91.16%
Skin irritation - 0.7034 70.34%
Skin corrosion - 0.6441 64.41%
Ames mutagenesis - 0.7500 75.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7712 77.12%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.6987 69.87%
skin sensitisation - 0.7258 72.58%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity - 0.5619 56.19%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.8816 88.16%
Acute Oral Toxicity (c) III 0.5978 59.78%
Estrogen receptor binding + 0.7286 72.86%
Androgen receptor binding + 0.7695 76.95%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.6236 62.36%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.5448 54.48%
Honey bee toxicity - 0.9838 98.38%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.7332 73.32%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.13% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.10% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.69% 96.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.76% 92.94%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.67% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.63% 97.25%
CHEMBL1951 P21397 Monoamine oxidase A 85.89% 91.49%
CHEMBL4040 P28482 MAP kinase ERK2 84.64% 83.82%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.38% 93.56%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.14% 95.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.95% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.63% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.51% 99.17%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.31% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Neurolaena lobata

Cross-Links

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PubChem 10348304
NPASS NPC9592
ChEMBL CHEMBL1224866
LOTUS LTS0220645
wikiData Q105124894