Cyclomarazine A

Details

Top
Internal ID a4da77ad-c579-45dc-b3e5-e9f8d32454e0
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name (3S,6S)-6-[(2R)-3-hydroxy-2-methylpropyl]-1-methyl-3-[[1-(2-methylbut-3-en-2-yl)indol-3-yl]methyl]piperazine-2,5-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C23H31N3O3/c1-6-23(3,4)26-13-16(17-9-7-8-10-19(17)26)12-18-22(29)25(5)20(21(28)24-18)11-15(2)14-27/h6-10,13,15,18,20,27H,1,11-12,14H2,2-5H3,(H,24,28)/t15-,18+,20+/m1/s1
InChI Key ZWMSTQYVOXSQRE-BPAFIMBUSA-N
Popularity 3 references in papers

Physical and Chemical Properties

Top
Molecular Formula C23H31N3O3
Molecular Weight 397.50 g/mol
Exact Mass 397.23654186 g/mol
Topological Polar Surface Area (TPSA) 74.60 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.45
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 7

Synonyms

Top
(3S,6S)-6-[(2R)-3-hydroxy-2-methylpropyl]-1-methyl-3-[[1-(2-methylbut-3-en-2-yl)indol-3-yl]methyl]piperazine-2,5-dione
(3S,6S)-6-((2R)-3-hydroxy-2-methylpropyl)-1-methyl-3-((1-(2-methylbut-3-en-2-yl)indol-3-yl)methyl)piperazine-2,5-dione
RefChem:129766
1019858-65-1
CHEBI:202807

2D Structure

Top
2D Structure of Cyclomarazine A

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9803 98.03%
Caco-2 - 0.6457 64.57%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.4586 45.86%
OATP2B1 inhibitior - 0.8595 85.95%
OATP1B1 inhibitior + 0.8828 88.28%
OATP1B3 inhibitior + 0.9313 93.13%
MATE1 inhibitior - 0.8280 82.80%
OCT2 inhibitior - 0.8463 84.63%
BSEP inhibitior + 0.8623 86.23%
P-glycoprotein inhibitior - 0.5383 53.83%
P-glycoprotein substrate + 0.5878 58.78%
CYP3A4 substrate + 0.6515 65.15%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8380 83.80%
CYP3A4 inhibition - 0.5555 55.55%
CYP2C9 inhibition - 0.6899 68.99%
CYP2C19 inhibition - 0.7477 74.77%
CYP2D6 inhibition - 0.8356 83.56%
CYP1A2 inhibition - 0.6236 62.36%
CYP2C8 inhibition - 0.7045 70.45%
CYP inhibitory promiscuity - 0.8056 80.56%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Non-required 0.6337 63.37%
Eye corrosion - 0.9880 98.80%
Eye irritation - 0.9897 98.97%
Skin irritation - 0.7736 77.36%
Skin corrosion - 0.9209 92.09%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9132 91.32%
Micronuclear + 0.6600 66.00%
Hepatotoxicity + 0.5245 52.45%
skin sensitisation - 0.8549 85.49%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.6577 65.77%
Acute Oral Toxicity (c) III 0.5459 54.59%
Estrogen receptor binding + 0.6396 63.96%
Androgen receptor binding + 0.6302 63.02%
Thyroid receptor binding + 0.7134 71.34%
Glucocorticoid receptor binding + 0.7073 70.73%
Aromatase binding + 0.6161 61.61%
PPAR gamma + 0.5430 54.30%
Honey bee toxicity - 0.8934 89.34%
Biodegradation - 0.9750 97.50%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.9236 92.36%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.16% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.86% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.70% 95.56%
CHEMBL5103 Q969S8 Histone deacetylase 10 96.54% 90.08%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.48% 96.09%
CHEMBL1937 Q92769 Histone deacetylase 2 95.74% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.02% 89.00%
CHEMBL3524 P56524 Histone deacetylase 4 89.88% 92.97%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.36% 99.23%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.86% 91.11%
CHEMBL3310 Q96DB2 Histone deacetylase 11 87.07% 88.56%
CHEMBL4040 P28482 MAP kinase ERK2 86.68% 83.82%
CHEMBL255 P29275 Adenosine A2b receptor 86.30% 98.59%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 86.12% 94.62%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.96% 94.45%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 85.46% 90.93%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 84.84% 96.47%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.03% 86.33%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 82.93% 93.65%
CHEMBL1949 P62937 Cyclophilin A 82.54% 98.57%
CHEMBL3401 O75469 Pregnane X receptor 82.36% 94.73%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 81.91% 100.00%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 81.63% 89.62%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.83% 92.62%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 25220880
LOTUS LTS0134194
wikiData Q77373662