Rhodopeptin B5

Details

Top
Internal ID be7319c1-3b10-47b7-a72d-741bfdff5d08
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Cyclic peptides
IUPAC Name (3S,6S,13R)-6-(4-aminobutyl)-13-(10-methylundecyl)-3-propan-2-yl-1,4,7,10-tetrazacyclotridecane-2,5,8,11-tetrone
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H53N5O4/c1-20(2)14-10-8-6-5-7-9-11-15-22-18-24(34)30-19-25(35)32-23(16-12-13-17-29)27(36)33-26(21(3)4)28(37)31-22/h20-23,26H,5-19,29H2,1-4H3,(H,30,34)(H,31,37)(H,32,35)(H,33,36)/t22-,23+,26+/m1/s1
InChI Key CQVSTNLAGJAEKO-UMFSSWHCSA-N
Popularity 5 references in papers

Physical and Chemical Properties

Top
Molecular Formula C28H53N5O4
Molecular Weight 523.80 g/mol
Exact Mass 523.40975519 g/mol
Topological Polar Surface Area (TPSA) 142.00 Ų
XlogP 4.70

Synonyms

Top
(3S,6S,13R)-6-(4-aminobutyl)-13-(10-methylundecyl)-3-propan-2-yl-1,4,7,10-tetrazacyclotridecane-2,5,8,11-tetrone
RefChem:179299
CHEBI:205963

2D Structure

Top
2D Structure of Rhodopeptin B5

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
No predicted properties yet!

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.09% 96.09%
CHEMBL2581 P07339 Cathepsin D 98.04% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.30% 91.11%
CHEMBL2996 Q05655 Protein kinase C delta 96.27% 97.79%
CHEMBL1937 Q92769 Histone deacetylase 2 95.53% 94.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.00% 97.09%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 94.83% 97.29%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.79% 94.45%
CHEMBL5103 Q969S8 Histone deacetylase 10 94.57% 90.08%
CHEMBL226 P30542 Adenosine A1 receptor 93.28% 95.93%
CHEMBL3038469 P24941 CDK2/Cyclin A 92.95% 91.38%
CHEMBL4581 P52732 Kinesin-like protein 1 92.73% 93.18%
CHEMBL299 P17252 Protein kinase C alpha 91.59% 98.03%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 91.35% 90.71%
CHEMBL3310 Q96DB2 Histone deacetylase 11 88.77% 88.56%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 88.55% 89.34%
CHEMBL3524 P56524 Histone deacetylase 4 88.47% 92.97%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 87.89% 97.23%
CHEMBL4296 Q15858 Sodium channel protein type IX alpha subunit 87.09% 96.11%
CHEMBL220 P22303 Acetylcholinesterase 86.94% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.66% 97.25%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.80% 95.50%
CHEMBL1907589 P17787 Neuronal acetylcholine receptor; alpha4/beta2 84.46% 94.55%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.26% 95.56%
CHEMBL2593 P30419 Peptide N-myristoyltransferase 1 83.91% 93.45%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 83.65% 96.47%
CHEMBL325 Q13547 Histone deacetylase 1 82.91% 95.92%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.84% 100.00%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 81.76% 92.86%
CHEMBL4071 P08311 Cathepsin G 81.65% 94.64%
CHEMBL255 P29275 Adenosine A2b receptor 80.52% 98.59%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 139588031
LOTUS LTS0135433
wikiData Q104968299