Cyclocalopin D

Details

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Internal ID 15533086-d4be-4e81-9ef5-f736fe807f04
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name [(1S,2R,3S,7S,9R,11S,14S)-14-hydroxy-3,9-dimethyl-6-oxo-13-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,8,10-trioxatetracyclo[9.3.1.01,9.02,7]pentadec-12-en-12-yl]methyl acetate
SMILES (Canonical) CC1COC(=O)C2C1C34CC(C(=C(C3O)OC5C(C(C(C(O5)CO)O)O)O)COC(=O)C)OC4(O2)C
SMILES (Isomeric) C[C@@H]1COC(=O)[C@@H]2[C@H]1[C@@]34C[C@@H](C(=C([C@H]3O)O[C@@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)COC(=O)C)O[C@@]4(O2)C
InChI InChI=1S/C23H32O13/c1-8-6-32-20(30)18-13(8)23-4-11(35-22(23,3)36-18)10(7-31-9(2)25)17(19(23)29)34-21-16(28)15(27)14(26)12(5-24)33-21/h8,11-16,18-19,21,24,26-29H,4-7H2,1-3H3/t8-,11+,12-,13+,14-,15+,16-,18+,19-,21-,22-,23+/m1/s1
InChI Key PDSOUSYYTLHECG-AYJSDROWSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C23H32O13
Molecular Weight 516.50 g/mol
Exact Mass 516.18429107 g/mol
Topological Polar Surface Area (TPSA) 191.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -2.31
H-Bond Acceptor 13
H-Bond Donor 5
Rotatable Bonds 5

Synonyms

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CHEBI:191996
[(1S,2R,3S,7S,9R,11S,14S)-14-hydroxy-3,9-dimethyl-6-oxo-13-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,8,10-trioxatetracyclo[9.3.1.01,9.02,7]pentadec-12-en-12-yl]methyl acetate

2D Structure

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2D Structure of Cyclocalopin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7344 73.44%
Caco-2 - 0.8488 84.88%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.7619 76.19%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8644 86.44%
OATP1B3 inhibitior + 0.9321 93.21%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.5751 57.51%
P-glycoprotein inhibitior - 0.5851 58.51%
P-glycoprotein substrate - 0.5739 57.39%
CYP3A4 substrate + 0.6932 69.32%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8773 87.73%
CYP3A4 inhibition - 0.8925 89.25%
CYP2C9 inhibition - 0.8789 87.89%
CYP2C19 inhibition - 0.8877 88.77%
CYP2D6 inhibition - 0.9518 95.18%
CYP1A2 inhibition - 0.8900 89.00%
CYP2C8 inhibition + 0.5373 53.73%
CYP inhibitory promiscuity - 0.9067 90.67%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6290 62.90%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9180 91.80%
Skin irritation - 0.6203 62.03%
Skin corrosion - 0.9411 94.11%
Ames mutagenesis + 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5820 58.20%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.6875 68.75%
skin sensitisation - 0.8979 89.79%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity + 0.7139 71.39%
Acute Oral Toxicity (c) I 0.5195 51.95%
Estrogen receptor binding + 0.7353 73.53%
Androgen receptor binding + 0.7284 72.84%
Thyroid receptor binding - 0.4876 48.76%
Glucocorticoid receptor binding + 0.6556 65.56%
Aromatase binding + 0.7014 70.14%
PPAR gamma + 0.6723 67.23%
Honey bee toxicity - 0.6982 69.82%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5450 54.50%
Fish aquatic toxicity + 0.9804 98.04%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.00% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.97% 85.14%
CHEMBL218 P21554 Cannabinoid CB1 receptor 98.20% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.22% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.50% 97.25%
CHEMBL2581 P07339 Cathepsin D 94.47% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.14% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.72% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.56% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 89.10% 91.49%
CHEMBL3401 O75469 Pregnane X receptor 87.95% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.77% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.97% 100.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 83.19% 91.24%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.63% 99.17%
CHEMBL226 P30542 Adenosine A1 receptor 81.79% 95.93%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.54% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 81.37% 92.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.86% 97.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.09% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 10918320
LOTUS LTS0167868
wikiData Q104665495