Cyclizidine B

Details

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Internal ID fa32ff55-9fbc-4727-88f8-3505805f7c25
Taxonomy Organoheterocyclic compounds > Indolizidines
IUPAC Name (1S,2S,3S,8aR)-3-[(1E,3E)-4-cyclopropyl-2-methylbuta-1,3-dienyl]-1-methyl-3,5,6,7,8,8a-hexahydro-2H-indolizine-1,2-diol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C17H27NO2/c1-12(6-7-13-8-9-13)11-14-16(19)17(2,20)15-5-3-4-10-18(14)15/h6-7,11,13-16,19-20H,3-5,8-10H2,1-2H3/b7-6+,12-11+/t14-,15+,16-,17-/m0/s1
InChI Key ABNQIBOOQKGLRG-BPODRKPHSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C17H27NO2
Molecular Weight 277.40 g/mol
Exact Mass 277.204179104 g/mol
Topological Polar Surface Area (TPSA) 43.70 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.25
H-Bond Acceptor 3
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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(1S,2S,3S,8aR)-3-[(1E,3E)-4-cyclopropyl-2-methylbuta-1,3-dienyl]-1-methyl-3,5,6,7,8,8a-hexahydro-2H-indolizine-1,2-diol
(1S,2S,3S,8aR)-3-((1E,3E)-4-cyclopropyl-2-methylbuta-1,3-dienyl)-1-methyl-3,5,6,7,8,8a-hexahydro-2H-indolizine-1,2-diol
RefChem:129222
CHEMBL4167272
CHEBI:208904
BDBM50286631

2D Structure

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2D Structure of Cyclizidine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9424 94.24%
Caco-2 + 0.8037 80.37%
Blood Brain Barrier + 0.6879 68.79%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.5883 58.83%
OATP2B1 inhibitior - 0.8586 85.86%
OATP1B1 inhibitior + 0.9332 93.32%
OATP1B3 inhibitior + 0.9506 95.06%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.6926 69.26%
P-glycoprotein inhibitior - 0.9318 93.18%
P-glycoprotein substrate - 0.6998 69.98%
CYP3A4 substrate + 0.5580 55.80%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.3838 38.38%
CYP3A4 inhibition - 0.9569 95.69%
CYP2C9 inhibition - 0.8391 83.91%
CYP2C19 inhibition - 0.8432 84.32%
CYP2D6 inhibition - 0.6798 67.98%
CYP1A2 inhibition - 0.7184 71.84%
CYP2C8 inhibition - 0.8717 87.17%
CYP inhibitory promiscuity - 0.8428 84.28%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5374 53.74%
Eye corrosion - 0.9804 98.04%
Eye irritation - 0.9978 99.78%
Skin irritation - 0.7130 71.30%
Skin corrosion - 0.8779 87.79%
Ames mutagenesis - 0.6254 62.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7032 70.32%
Micronuclear + 0.5200 52.00%
Hepatotoxicity + 0.5282 52.82%
skin sensitisation - 0.7821 78.21%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity + 0.4658 46.58%
Acute Oral Toxicity (c) III 0.5435 54.35%
Estrogen receptor binding + 0.8483 84.83%
Androgen receptor binding - 0.6282 62.82%
Thyroid receptor binding + 0.6086 60.86%
Glucocorticoid receptor binding + 0.7544 75.44%
Aromatase binding - 0.5731 57.31%
PPAR gamma + 0.5995 59.95%
Honey bee toxicity - 0.8643 86.43%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity - 0.3808 38.08%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.60% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.98% 98.95%
CHEMBL4040 P28482 MAP kinase ERK2 93.08% 83.82%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.05% 95.89%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.83% 95.50%
CHEMBL1937 Q92769 Histone deacetylase 2 86.54% 94.75%
CHEMBL237 P41145 Kappa opioid receptor 86.10% 98.10%
CHEMBL241 Q14432 Phosphodiesterase 3A 85.96% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.88% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.40% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 84.14% 91.11%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 83.95% 93.04%
CHEMBL5103 Q969S8 Histone deacetylase 10 82.75% 90.08%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 80.33% 98.33%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.25% 93.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589900
LOTUS LTS0050366
wikiData Q105161855