(6R)-6-[(1R,3R,6S,8R,11S,12S,14S,15R,16R,18R)-6,18-dihydroxy-7,7,12,16-tetramethyl-14-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-15-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]-2-methylheptan-3-one

Details

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Internal ID ead7f8e5-2537-47cb-8da0-1ffffe6b19d1
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (6R)-6-[(1R,3R,6S,8R,11S,12S,14S,15R,16R,18R)-6,18-dihydroxy-7,7,12,16-tetramethyl-14-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-15-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]-2-methylheptan-3-one
SMILES (Canonical) CC(C)C(=O)CCC(C)C1C(CC2(C1(CC(C34C2CCC5C3(C4)CCC(C5(C)C)O)O)C)C)OC6C(C(C(CO6)O)O)O
SMILES (Isomeric) C[C@H](CCC(=O)C(C)C)[C@H]1[C@H](C[C@@]2([C@@]1(C[C@H]([C@]34[C@H]2CC[C@@H]5[C@]3(C4)CC[C@@H](C5(C)C)O)O)C)C)O[C@H]6[C@@H]([C@H]([C@H](CO6)O)O)O
InChI InChI=1S/C35H58O8/c1-18(2)20(36)9-8-19(3)27-22(43-30-29(41)28(40)21(37)16-42-30)14-32(6)24-11-10-23-31(4,5)25(38)12-13-34(23)17-35(24,34)26(39)15-33(27,32)7/h18-19,21-30,37-41H,8-17H2,1-7H3/t19-,21+,22+,23+,24+,25+,26-,27+,28+,29-,30+,32+,33-,34-,35+/m1/s1
InChI Key DMOJARJGPBYTOF-UONXQXKBSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C35H58O8
Molecular Weight 606.80 g/mol
Exact Mass 606.41316880 g/mol
Topological Polar Surface Area (TPSA) 137.00 Ų
XlogP 3.90
Atomic LogP (AlogP) 3.83
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (6R)-6-[(1R,3R,6S,8R,11S,12S,14S,15R,16R,18R)-6,18-dihydroxy-7,7,12,16-tetramethyl-14-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-15-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]-2-methylheptan-3-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7852 78.52%
Caco-2 - 0.8124 81.24%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7471 74.71%
OATP2B1 inhibitior - 0.7163 71.63%
OATP1B1 inhibitior + 0.8668 86.68%
OATP1B3 inhibitior + 0.9197 91.97%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8292 82.92%
BSEP inhibitior + 0.5956 59.56%
P-glycoprotein inhibitior + 0.6502 65.02%
P-glycoprotein substrate + 0.5083 50.83%
CYP3A4 substrate + 0.7200 72.00%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8431 84.31%
CYP3A4 inhibition - 0.8727 87.27%
CYP2C9 inhibition - 0.7008 70.08%
CYP2C19 inhibition - 0.8198 81.98%
CYP2D6 inhibition - 0.9534 95.34%
CYP1A2 inhibition - 0.8024 80.24%
CYP2C8 inhibition + 0.5177 51.77%
CYP inhibitory promiscuity - 0.9534 95.34%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7400 74.00%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.9169 91.69%
Skin irritation - 0.6440 64.40%
Skin corrosion - 0.9427 94.27%
Ames mutagenesis - 0.6615 66.15%
Human Ether-a-go-go-Related Gene inhibition + 0.7507 75.07%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.8218 82.18%
skin sensitisation - 0.8959 89.59%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.8839 88.39%
Acute Oral Toxicity (c) I 0.3892 38.92%
Estrogen receptor binding + 0.5456 54.56%
Androgen receptor binding + 0.7467 74.67%
Thyroid receptor binding - 0.5289 52.89%
Glucocorticoid receptor binding + 0.6530 65.30%
Aromatase binding + 0.7098 70.98%
PPAR gamma + 0.6340 63.40%
Honey bee toxicity - 0.6458 64.58%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9417 94.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.85% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.34% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 97.98% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.82% 96.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 96.35% 96.77%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.67% 97.09%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 94.33% 95.17%
CHEMBL4302 P08183 P-glycoprotein 1 94.12% 92.98%
CHEMBL2581 P07339 Cathepsin D 92.95% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.20% 94.45%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 90.60% 92.62%
CHEMBL340 P08684 Cytochrome P450 3A4 87.84% 91.19%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 86.98% 96.21%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 86.86% 96.95%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 86.49% 96.47%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.41% 91.24%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.26% 95.89%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 84.83% 92.78%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.68% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.40% 94.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.05% 95.89%
CHEMBL3837 P07711 Cathepsin L 83.24% 96.61%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.76% 92.88%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.50% 96.38%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.47% 95.50%
CHEMBL1075317 P61964 WD repeat-containing protein 5 81.81% 96.33%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 81.41% 89.05%
CHEMBL2007625 O75874 Isocitrate dehydrogenase [NADP] cytoplasmic 80.51% 99.00%
CHEMBL3437 Q16853 Amine oxidase, copper containing 80.22% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.14% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Beilschmiedia erithrophloia
Curculigo orchioides

Cross-Links

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PubChem 101618895
NPASS NPC206756
LOTUS LTS0066203
wikiData Q105200995