Cubebininolide

Details

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Internal ID cb61f745-25ed-4d0d-ab93-2cc35962c47c
Taxonomy Lignans, neolignans and related compounds > Furanoid lignans > Tetrahydrofuran lignans > 9,9-epoxylignans > Dibenzylbutyrolactone lignans
IUPAC Name 3,4-bis[(3,4,5-trimethoxyphenyl)methyl]oxolan-2-one
SMILES (Canonical) COC1=CC(=CC(=C1OC)OC)CC2COC(=O)C2CC3=CC(=C(C(=C3)OC)OC)OC
SMILES (Isomeric) COC1=CC(=CC(=C1OC)OC)CC2COC(=O)C2CC3=CC(=C(C(=C3)OC)OC)OC
InChI InChI=1S/C24H30O8/c1-26-18-9-14(10-19(27-2)22(18)30-5)7-16-13-32-24(25)17(16)8-15-11-20(28-3)23(31-6)21(12-15)29-4/h9-12,16-17H,7-8,13H2,1-6H3
InChI Key VUNCHONBJWJYID-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C24H30O8
Molecular Weight 446.50 g/mol
Exact Mass 446.19406791 g/mol
Topological Polar Surface Area (TPSA) 81.70 Ų
XlogP 3.90
Atomic LogP (AlogP) 3.31
H-Bond Acceptor 8
H-Bond Donor 0
Rotatable Bonds 10

Synonyms

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3,4-bis[(3,4,5-trimethoxyphenyl)methyl]oxolan-2-one
Cordigerin
117407-00-8
2(3H)-Furanone, dihydro-3,4-bis[(3,4,5-trimethoxyphenyl)methyl]-
SCHEMBL7441349
DTXSID70433624
CHEBI:191572
VUNCHONBJWJYID-UHFFFAOYSA-N
3,3',4,4',5,5'-Hexamethoxylignan-9,9'-olide
2,3-bis[1-(3,4,5-trimethoxyphenyl)methyl]butanolide

2D Structure

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2D Structure of Cubebininolide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9864 98.64%
Caco-2 + 0.6978 69.78%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.8655 86.55%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9435 94.35%
OATP1B3 inhibitior + 0.9353 93.53%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.9445 94.45%
P-glycoprotein inhibitior + 0.8397 83.97%
P-glycoprotein substrate - 0.8563 85.63%
CYP3A4 substrate - 0.5000 50.00%
CYP2C9 substrate - 0.5890 58.90%
CYP2D6 substrate - 0.7449 74.49%
CYP3A4 inhibition + 0.7369 73.69%
CYP2C9 inhibition + 0.8327 83.27%
CYP2C19 inhibition + 0.9577 95.77%
CYP2D6 inhibition - 0.9020 90.20%
CYP1A2 inhibition + 0.9367 93.67%
CYP2C8 inhibition - 0.7412 74.12%
CYP inhibitory promiscuity + 0.9344 93.44%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.6126 61.26%
Eye corrosion - 0.9754 97.54%
Eye irritation - 0.8497 84.97%
Skin irritation - 0.8897 88.97%
Skin corrosion - 0.9891 98.91%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7874 78.74%
Micronuclear + 0.5092 50.92%
Hepatotoxicity - 0.5000 50.00%
skin sensitisation - 0.8130 81.30%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.5444 54.44%
Mitochondrial toxicity - 0.6875 68.75%
Nephrotoxicity + 0.4532 45.32%
Acute Oral Toxicity (c) III 0.6074 60.74%
Estrogen receptor binding + 0.8891 88.91%
Androgen receptor binding + 0.6362 63.62%
Thyroid receptor binding + 0.6361 63.61%
Glucocorticoid receptor binding + 0.7866 78.66%
Aromatase binding - 0.5183 51.83%
PPAR gamma + 0.6383 63.83%
Honey bee toxicity - 0.7446 74.46%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9932 99.32%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 99.41% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.20% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.72% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.49% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.86% 94.45%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 90.91% 92.62%
CHEMBL2581 P07339 Cathepsin D 90.89% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.69% 86.33%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.41% 97.14%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.25% 99.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.26% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.97% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.69% 94.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.29% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.64% 97.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 9981005
LOTUS LTS0017760
wikiData Q82247817