Corymbiferin

Details

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Internal ID 5ca62d7a-797f-419c-831a-cffa625fd9d8
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,3,8-trihydroxy-4,5-dimethoxyxanthen-9-one
SMILES (Canonical) COC1=C2C(=C(C=C1)O)C(=O)C3=C(O2)C(=C(C=C3O)O)OC
SMILES (Isomeric) COC1=C2C(=C(C=C1)O)C(=O)C3=C(O2)C(=C(C=C3O)O)OC
InChI InChI=1S/C15H12O7/c1-20-9-4-3-6(16)10-12(19)11-7(17)5-8(18)13(21-2)15(11)22-14(9)10/h3-5,16-18H,1-2H3
InChI Key MXKGQHAVANZONW-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C15H12O7
Molecular Weight 304.25 g/mol
Exact Mass 304.05830272 g/mol
Topological Polar Surface Area (TPSA) 105.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 2.08
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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5042-09-1
1,3,8-TRIHYDROXY-4,5-DIMETHOXYXANTHEN-9-ONE
4,5-Dimethoxy-1,3,8-trihydroxyxanthone
DTXSID00904216
HY-N9363
AKOS040758164
1,3,8-Trihydroxy-4,5-dimethoxyxanthon
CS-0159525
E88969
1,3,8-trihydroxy-4,5-dimethoxy-9H-xanthen-9-one
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Corymbiferin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9261 92.61%
Caco-2 + 0.7941 79.41%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.5592 55.92%
OATP2B1 inhibitior - 0.7006 70.06%
OATP1B1 inhibitior + 0.9471 94.71%
OATP1B3 inhibitior + 0.9627 96.27%
MATE1 inhibitior + 0.5400 54.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.7328 73.28%
P-glycoprotein inhibitior - 0.7154 71.54%
P-glycoprotein substrate - 0.8932 89.32%
CYP3A4 substrate - 0.5526 55.26%
CYP2C9 substrate - 0.6401 64.01%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition + 0.6908 69.08%
CYP2C9 inhibition - 0.7416 74.16%
CYP2C19 inhibition + 0.6596 65.96%
CYP2D6 inhibition - 0.5311 53.11%
CYP1A2 inhibition + 0.9466 94.66%
CYP2C8 inhibition - 0.6331 63.31%
CYP inhibitory promiscuity + 0.7479 74.79%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6775 67.75%
Eye corrosion - 0.9667 96.67%
Eye irritation + 0.9193 91.93%
Skin irritation - 0.6148 61.48%
Skin corrosion - 0.9417 94.17%
Ames mutagenesis + 0.6436 64.36%
Human Ether-a-go-go-Related Gene inhibition - 0.6613 66.13%
Micronuclear + 0.9100 91.00%
Hepatotoxicity - 0.5053 50.53%
skin sensitisation - 0.8849 88.49%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity + 0.4564 45.64%
Acute Oral Toxicity (c) III 0.6228 62.28%
Estrogen receptor binding + 0.8937 89.37%
Androgen receptor binding + 0.7555 75.55%
Thyroid receptor binding + 0.6154 61.54%
Glucocorticoid receptor binding + 0.9307 93.07%
Aromatase binding + 0.7537 75.37%
PPAR gamma + 0.7911 79.11%
Honey bee toxicity - 0.9146 91.46%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5849 58.49%
Fish aquatic toxicity + 0.8268 82.68%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.12% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.96% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.03% 95.56%
CHEMBL3194 P02766 Transthyretin 90.32% 90.71%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.84% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.50% 86.33%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.08% 99.15%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.83% 94.45%
CHEMBL2535 P11166 Glucose transporter 84.34% 98.75%
CHEMBL1255126 O15151 Protein Mdm4 84.25% 90.20%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.31% 99.17%
CHEMBL2581 P07339 Cathepsin D 82.13% 98.95%
CHEMBL4208 P20618 Proteasome component C5 81.33% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gentianopsis crinita

Cross-Links

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PubChem 71437983
LOTUS LTS0159138
wikiData Q82873454