Coreajaponins B

Details

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Internal ID 6a145753-5909-4656-9625-39f8f87d7352
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-2-[[(1S,2S,4S,6R,7S,8R,9S,12S,13R,16S)-6-methoxy-7,9,13-trimethyl-6-[(3R)-3-methyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-en-16-yl]oxy]-5-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C51H84O22/c1-21(19-65-45-40(61)38(59)36(57)31(17-52)69-45)9-14-51(64-6)22(2)33-30(73-51)16-28-26-8-7-24-15-25(10-12-49(24,4)27(26)11-13-50(28,33)5)68-48-44(72-47-41(62)37(58)34(55)23(3)67-47)42(63)43(32(18-53)70-48)71-46-39(60)35(56)29(54)20-66-46/h7,21-23,25-48,52-63H,8-20H2,1-6H3/t21-,22+,23+,25+,26-,27+,28+,29+,30+,31-,32-,33+,34+,35+,36-,37-,38+,39-,40-,41-,42+,43-,44-,45-,46+,47+,48-,49+,50+,51-/m1/s1
InChI Key OGDZMTXQECKLNF-YDCIINMYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C51H84O22
Molecular Weight 1049.20 g/mol
Exact Mass 1048.54542430 g/mol
Topological Polar Surface Area (TPSA) 335.00 Ų
XlogP -1.10
Atomic LogP (AlogP) -1.71
H-Bond Acceptor 22
H-Bond Donor 12
Rotatable Bonds 15

Synonyms

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RefChem:128024
(2S,3R,4R,5R,6S)-2-((2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-2-(((1S,2S,4S,6R,7S,8R,9S,12S,13R,16S)-6-methoxy-7,9,13-trimethyl-6-((3R)-3-methyl-4-((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl)oxybutyl)-5-oxapentacyclo(10.8.0.02,9.04,8.013,18)icos-18-en-16-yl)oxy)-5-((2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl)oxyoxan-3-yl)oxy-6-methyloxane-3,4,5-triol
(2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-4-hydroxy-6-(hydroxymethyl)-2-[[(1S,2S,4S,6R,7S,8R,9S,12S,13R,16S)-6-methoxy-7,9,13-trimethyl-6-[(3R)-3-methyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-en-16-yl]oxy]-5-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
CHEMBL1761957

2D Structure

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2D Structure of Coreajaponins B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7474 74.74%
Caco-2 - 0.8864 88.64%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.7129 71.29%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8635 86.35%
OATP1B3 inhibitior + 0.9262 92.62%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.8949 89.49%
P-glycoprotein inhibitior + 0.7414 74.14%
P-glycoprotein substrate + 0.7146 71.46%
CYP3A4 substrate + 0.7557 75.57%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.9441 94.41%
CYP2C9 inhibition - 0.9179 91.79%
CYP2C19 inhibition - 0.9105 91.05%
CYP2D6 inhibition - 0.9346 93.46%
CYP1A2 inhibition - 0.9105 91.05%
CYP2C8 inhibition + 0.7687 76.87%
CYP inhibitory promiscuity - 0.9390 93.90%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5094 50.94%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9045 90.45%
Skin irritation - 0.5613 56.13%
Skin corrosion - 0.9417 94.17%
Ames mutagenesis - 0.8878 88.78%
Human Ether-a-go-go-Related Gene inhibition + 0.8526 85.26%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.9125 91.25%
skin sensitisation - 0.9128 91.28%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.9580 95.80%
Acute Oral Toxicity (c) I 0.5855 58.55%
Estrogen receptor binding + 0.8611 86.11%
Androgen receptor binding + 0.7248 72.48%
Thyroid receptor binding + 0.5519 55.19%
Glucocorticoid receptor binding + 0.6894 68.94%
Aromatase binding + 0.6768 67.68%
PPAR gamma + 0.7907 79.07%
Honey bee toxicity - 0.5892 58.92%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.8517 85.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.09% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.07% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 98.79% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.83% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.34% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.71% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.93% 100.00%
CHEMBL2581 P07339 Cathepsin D 91.13% 98.95%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.07% 96.61%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.92% 95.89%
CHEMBL1914 P06276 Butyrylcholinesterase 89.11% 95.00%
CHEMBL1937 Q92769 Histone deacetylase 2 88.53% 94.75%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 88.40% 89.05%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.03% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.69% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 86.31% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.18% 86.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.99% 93.56%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 85.86% 94.08%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 83.67% 92.88%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 83.65% 100.00%
CHEMBL237 P41145 Kappa opioid receptor 83.16% 98.10%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.13% 94.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 82.85% 97.29%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.82% 100.00%
CHEMBL1871 P10275 Androgen Receptor 81.66% 96.43%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 80.95% 92.86%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 80.91% 97.33%
CHEMBL4581 P52732 Kinesin-like protein 1 80.83% 93.18%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.61% 96.00%
CHEMBL2360 P00492 Hypoxanthine-guanine phosphoribosyltransferase 80.38% 87.38%
CHEMBL5028 O14672 ADAM10 80.29% 97.50%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 80.15% 98.46%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea japonica

Cross-Links

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PubChem 54582391
NPASS NPC232054
LOTUS LTS0265413
wikiData Q105191558