Colubrinoside (colubrina asiatica)

Details

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Internal ID d631fef0-0f1b-4836-8859-c9da82d6641f
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name [6-[3-acetyloxy-5-hydroxy-2-[[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-enyl)-19,21-dioxahexacyclo[18.2.1.01,14.02,11.05,10.015,20]tricosan-7-yl]oxy]oxan-4-yl]oxy-5-hydroxy-2-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-3-yl] acetate
SMILES (Canonical) CC(=CC1CC(C2C3CCC4C5(CCC(C(C5CCC4(C36CC2(O1)OC6)C)(C)C)OC7C(C(C(CO7)O)OC8C(C(C(C(O8)CO)OC(=O)C)OC9C(C(C(CO9)O)O)O)O)OC(=O)C)C)(C)O)C
SMILES (Isomeric) CC(=CC1CC(C2C3CCC4C5(CCC(C(C5CCC4(C36CC2(O1)OC6)C)(C)C)OC7C(C(C(CO7)O)OC8C(C(C(C(O8)CO)OC(=O)C)OC9C(C(C(CO9)O)O)O)O)OC(=O)C)C)(C)O)C
InChI InChI=1S/C50H78O19/c1-23(2)16-26-17-48(9,59)41-27-10-11-32-46(7)14-13-33(45(5,6)31(46)12-15-47(32,8)49(27)21-50(41,69-26)62-22-49)66-44-40(64-25(4)53)37(29(55)20-61-44)67-43-36(58)39(38(63-24(3)52)30(18-51)65-43)68-42-35(57)34(56)28(54)19-60-42/h16,26-44,51,54-59H,10-15,17-22H2,1-9H3
InChI Key XZQXLJBNWHQGAB-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C50H78O19
Molecular Weight 983.10 g/mol
Exact Mass 982.51373025 g/mol
Topological Polar Surface Area (TPSA) 268.00 Ų
XlogP 2.20
Atomic LogP (AlogP) 1.75
H-Bond Acceptor 19
H-Bond Donor 7
Rotatable Bonds 10

Synonyms

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alpha-L-Arabinopyranoside, (3-beta,16-beta,23R)-16,23:16,30-diepoxy-20-hydroxydammar-24-en-3-yl O-beta-D-xylopyranosyl-(1-3)-O-4-O-acetyl-beta-D-glucopyranosyl-(1-3)-, 2-acetate
alpha-L-Arabinopyranoside, (3beta,16beta,23R)-16,23:16,30-diepoxy-20-hydroxydammar-24-en-3-yl O-beta-D-xylopyranosyl-(1-3)-O-4-O-acetyl-beta-D-glucopyranosyl-(1-3)-, 2-acetate
87834-10-4
DTXSID301099726
LS-21524
alpha-L-Arabinopyranoside, (3beta,16beta,23R)-16,23:16,30-diepoxy-20-hydroxydammar-24-en-3-yl O-beta-D-xylopyranosyl-(1-->3)-O-4-O-acetyl-beta-D-glucopyranosyl-(1-->3)-, 2-acetate

2D Structure

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2D Structure of Colubrinoside (colubrina asiatica)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7917 79.17%
Caco-2 - 0.8780 87.80%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.8458 84.58%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8223 82.23%
OATP1B3 inhibitior + 0.8881 88.81%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.9472 94.72%
P-glycoprotein inhibitior + 0.7524 75.24%
P-glycoprotein substrate + 0.5754 57.54%
CYP3A4 substrate + 0.7584 75.84%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8822 88.22%
CYP3A4 inhibition - 0.8360 83.60%
CYP2C9 inhibition - 0.8351 83.51%
CYP2C19 inhibition - 0.9177 91.77%
CYP2D6 inhibition - 0.9396 93.96%
CYP1A2 inhibition - 0.9135 91.35%
CYP2C8 inhibition + 0.7382 73.82%
CYP inhibitory promiscuity - 0.9470 94.70%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5431 54.31%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9036 90.36%
Skin irritation - 0.5151 51.51%
Skin corrosion - 0.9401 94.01%
Ames mutagenesis - 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7421 74.21%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9076 90.76%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.6972 69.72%
Acute Oral Toxicity (c) I 0.4634 46.34%
Estrogen receptor binding + 0.8182 81.82%
Androgen receptor binding + 0.7570 75.70%
Thyroid receptor binding + 0.5402 54.02%
Glucocorticoid receptor binding + 0.7750 77.50%
Aromatase binding + 0.6561 65.61%
PPAR gamma + 0.8229 82.29%
Honey bee toxicity - 0.5820 58.20%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5245 52.45%
Fish aquatic toxicity + 0.9655 96.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.92% 96.09%
CHEMBL325 Q13547 Histone deacetylase 1 96.88% 95.92%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.48% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.86% 97.25%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 93.37% 91.24%
CHEMBL2581 P07339 Cathepsin D 93.13% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 91.01% 95.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.56% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.17% 96.61%
CHEMBL3922 P50579 Methionine aminopeptidase 2 89.10% 97.28%
CHEMBL340 P08684 Cytochrome P450 3A4 88.73% 91.19%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.72% 95.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.59% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.40% 89.00%
CHEMBL1937 Q92769 Histone deacetylase 2 88.17% 94.75%
CHEMBL5255 O00206 Toll-like receptor 4 87.90% 92.50%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 86.85% 98.75%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.79% 82.69%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 86.42% 89.05%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.21% 92.62%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.97% 95.89%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 85.83% 94.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.20% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.16% 95.89%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 85.09% 97.47%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.87% 97.14%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.79% 100.00%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 83.69% 95.36%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.47% 95.56%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 81.77% 95.71%
CHEMBL5555 O00767 Acyl-CoA desaturase 81.39% 97.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 81.38% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.11% 99.17%
CHEMBL279 P35968 Vascular endothelial growth factor receptor 2 80.97% 95.52%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.74% 94.00%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 80.09% 98.99%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Strychnos nux-vomica

Cross-Links

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PubChem 3071390
NPASS NPC95053