Colletopeptide D

Details

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Internal ID 5149a864-1dbf-4c3d-b7d6-97cec1eec958
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name (3S,6R,9R,10R,12R)-6-benzyl-3-[(2S)-butan-2-yl]-10-hydroxy-12-[(6R)-6-hydroxyheptyl]-4,9-dimethyl-1-oxa-4,7-diazacyclododecane-2,5,8-trione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H46N2O6/c1-6-19(2)26-29(36)37-23(16-12-7-9-13-20(3)32)18-25(33)21(4)27(34)30-24(28(35)31(26)5)17-22-14-10-8-11-15-22/h8,10-11,14-15,19-21,23-26,32-33H,6-7,9,12-13,16-18H2,1-5H3,(H,30,34)/t19-,20+,21+,23+,24+,25+,26-/m0/s1
InChI Key FYFLUENRPAAKQH-PFDGYMCOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C29H46N2O6
Molecular Weight 518.70 g/mol
Exact Mass 518.33558719 g/mol
Topological Polar Surface Area (TPSA) 116.00 Ų
XlogP 4.50
Atomic LogP (AlogP) 3.23
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 10

Synonyms

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(3S,6R,9R,10R,12R)-6-benzyl-3-[(2S)-butan-2-yl]-10-hydroxy-12-[(6R)-6-hydroxyheptyl]-4,9-dimethyl-1-oxa-4,7-diazacyclododecane-2,5,8-trione
(3S,6R,9R,10R,12R)-6-benzyl-3-((2S)-butan-2-yl)-10-hydroxy-12-((6R)-6-hydroxyheptyl)-4,9-dimethyl-1-oxa-4,7-diazacyclododecane-2,5,8-trione
RefChem:127480
CHEBI:223996

2D Structure

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2D Structure of Colletopeptide D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6763 67.63%
Caco-2 - 0.7197 71.97%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.4666 46.66%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8765 87.65%
OATP1B3 inhibitior + 0.8723 87.23%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8140 81.40%
BSEP inhibitior + 0.6013 60.13%
P-glycoprotein inhibitior + 0.7552 75.52%
P-glycoprotein substrate + 0.8122 81.22%
CYP3A4 substrate + 0.6720 67.20%
CYP2C9 substrate - 0.6017 60.17%
CYP2D6 substrate - 0.8162 81.62%
CYP3A4 inhibition + 0.8024 80.24%
CYP2C9 inhibition - 0.8837 88.37%
CYP2C19 inhibition - 0.8455 84.55%
CYP2D6 inhibition - 0.8938 89.38%
CYP1A2 inhibition - 0.9069 90.69%
CYP2C8 inhibition - 0.6338 63.38%
CYP inhibitory promiscuity - 0.9019 90.19%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9000 90.00%
Carcinogenicity (trinary) Non-required 0.6580 65.80%
Eye corrosion - 0.9910 99.10%
Eye irritation - 0.9732 97.32%
Skin irritation - 0.7940 79.40%
Skin corrosion - 0.9336 93.36%
Ames mutagenesis - 0.7460 74.60%
Human Ether-a-go-go-Related Gene inhibition + 0.7419 74.19%
Micronuclear + 0.7800 78.00%
Hepatotoxicity + 0.5909 59.09%
skin sensitisation - 0.8943 89.43%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.7695 76.95%
Acute Oral Toxicity (c) III 0.6385 63.85%
Estrogen receptor binding + 0.6196 61.96%
Androgen receptor binding + 0.5528 55.28%
Thyroid receptor binding - 0.5755 57.55%
Glucocorticoid receptor binding + 0.6633 66.33%
Aromatase binding - 0.5453 54.53%
PPAR gamma + 0.5663 56.63%
Honey bee toxicity - 0.8324 83.24%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.7995 79.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.54% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.54% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 96.91% 83.82%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.70% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.48% 95.56%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 92.21% 97.64%
CHEMBL5103 Q969S8 Histone deacetylase 10 92.19% 90.08%
CHEMBL3401 O75469 Pregnane X receptor 90.94% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.32% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.32% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.18% 97.25%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 86.93% 95.50%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 86.70% 96.47%
CHEMBL3192 Q9BY41 Histone deacetylase 8 86.57% 93.99%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 86.10% 82.38%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.80% 94.45%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 85.62% 93.00%
CHEMBL1949 P62937 Cyclophilin A 84.68% 98.57%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.90% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.28% 89.00%
CHEMBL5805 Q9NR97 Toll-like receptor 8 83.26% 96.25%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.24% 93.56%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 80.78% 95.48%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 80.62% 95.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.21% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 145720960
LOTUS LTS0269719
wikiData Q105004449