Coformycin

Details

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Internal ID f5bfd409-8dfb-44b0-91e2-f5f14d7cef7a
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Glycosylamines
IUPAC Name (2R,3R,4S,5R)-2-[(8R)-8-hydroxy-7,8-dihydro-4H-imidazo[4,5-d][1,3]diazepin-3-yl]-5-(hydroxymethyl)oxolane-3,4-diol
SMILES (Canonical) C1C(C2=C(NC=N1)N(C=N2)C3C(C(C(O3)CO)O)O)O
SMILES (Isomeric) C1[C@H](C2=C(NC=N1)N(C=N2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O)O
InChI InChI=1S/C11H16N4O5/c16-2-6-8(18)9(19)11(20-6)15-4-14-7-5(17)1-12-3-13-10(7)15/h3-6,8-9,11,16-19H,1-2H2,(H,12,13)/t5-,6-,8-,9-,11-/m1/s1
InChI Key YOOVTUPUBVHMPG-LODYRLCVSA-N
Popularity 516 references in papers

Physical and Chemical Properties

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Molecular Formula C11H16N4O5
Molecular Weight 284.27 g/mol
Exact Mass 284.11206962 g/mol
Topological Polar Surface Area (TPSA) 132.00 Ų
XlogP -3.10
Atomic LogP (AlogP) -2.02
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 2

Synonyms

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11033-22-0
(R)-3,4,7,8-Tetrahydro-3-beta-D-ribofuranosylimidazo(4,5-d)(1,3)diazepin-8-ol
Imidazo(4,5-d)(1,3)diazepin-8-ol, 3,4,7,8-tetrahydro-3-beta-D-ribofuranosyl-, (R)-
CHEBI:16213
E49510ZL0H
NSC-277817
NSC 277817
(8R)-3-beta-D-ribofuranosyl-3,6,7,8-tetrahydroimidazo[4,5-d][1,3]diazepin-8-ol
CHEMBL284483
UNII-E49510ZL0H
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Coformycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7788 77.88%
Caco-2 - 0.8403 84.03%
Blood Brain Barrier + 0.8500 85.00%
Human oral bioavailability - 0.9143 91.43%
Subcellular localzation Nucleus 0.5456 54.56%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9201 92.01%
OATP1B3 inhibitior + 0.9435 94.35%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9540 95.40%
P-glycoprotein inhibitior - 0.9317 93.17%
P-glycoprotein substrate - 0.8115 81.15%
CYP3A4 substrate - 0.5193 51.93%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8593 85.93%
CYP3A4 inhibition - 0.9221 92.21%
CYP2C9 inhibition - 0.9091 90.91%
CYP2C19 inhibition - 0.8961 89.61%
CYP2D6 inhibition - 0.9170 91.70%
CYP1A2 inhibition - 0.8527 85.27%
CYP2C8 inhibition - 0.8669 86.69%
CYP inhibitory promiscuity - 0.9465 94.65%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8800 88.00%
Carcinogenicity (trinary) Non-required 0.6445 64.45%
Eye corrosion - 0.9876 98.76%
Eye irritation - 0.9729 97.29%
Skin irritation - 0.7370 73.70%
Skin corrosion - 0.9229 92.29%
Ames mutagenesis - 0.6107 61.07%
Human Ether-a-go-go-Related Gene inhibition - 0.6426 64.26%
Micronuclear + 0.9800 98.00%
Hepatotoxicity + 0.5513 55.13%
skin sensitisation - 0.8215 82.15%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 1.0000 100.00%
Nephrotoxicity - 0.9356 93.56%
Acute Oral Toxicity (c) III 0.5834 58.34%
Estrogen receptor binding - 0.6043 60.43%
Androgen receptor binding - 0.7407 74.07%
Thyroid receptor binding + 0.5952 59.52%
Glucocorticoid receptor binding - 0.5050 50.50%
Aromatase binding + 0.7013 70.13%
PPAR gamma - 0.5463 54.63%
Honey bee toxicity - 0.9144 91.44%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity - 0.9178 91.78%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.10% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.56% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 93.10% 95.93%
CHEMBL3589 P55263 Adenosine kinase 91.04% 98.05%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.21% 97.09%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 86.41% 95.83%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 84.41% 93.10%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.40% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.29% 89.00%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 83.86% 98.46%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 83.83% 96.67%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.21% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.07% 95.89%
CHEMBL2581 P07339 Cathepsin D 81.53% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 80.51% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.24% 97.25%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 80.09% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 25447
LOTUS LTS0186195
wikiData Q27098587