Cochinchinone B

Details

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Internal ID 740102f4-e02e-4e67-86d8-33732b34bc68
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > 4-prenylated xanthones
IUPAC Name 5-[(2E)-3,7-dimethylocta-2,6-dienyl]-1,3,6,7-tetrahydroxy-2-(3-methylbut-2-enyl)xanthen-9-one
SMILES (Canonical) CC(=CCCC(=CCC1=C2C(=CC(=C1O)O)C(=O)C3=C(O2)C=C(C(=C3O)CC=C(C)C)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC1=C2C(=CC(=C1O)O)C(=O)C3=C(O2)C=C(C(=C3O)CC=C(C)C)O)/C)C
InChI InChI=1S/C28H32O6/c1-15(2)7-6-8-17(5)10-12-19-25(31)22(30)13-20-27(33)24-23(34-28(19)20)14-21(29)18(26(24)32)11-9-16(3)4/h7,9-10,13-14,29-32H,6,8,11-12H2,1-5H3/b17-10+
InChI Key QRQRZDHZRAXLKZ-LICLKQGHSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C28H32O6
Molecular Weight 464.50 g/mol
Exact Mass 464.21988874 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 7.80
Atomic LogP (AlogP) 6.51
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

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CHEBI:65647
CHEMBL1173563
5-[(2E)-3,7-dimethylocta-2,6-dienyl]-1,3,6,7-tetrahydroxy-2-(3-methylbut-2-enyl)xanthen-9-one
Q27134117
1,3,6,7-tetrahydroxy-2-(3-methyl-2-butenyl)-5-(3,7-dimethyl-2,6-octadienyl)xanthone
5-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-1,3,6,7-tetrahydroxy-2-(3-methylbut-2-en-1-yl)-9H-xanthen-9-one

2D Structure

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2D Structure of Cochinchinone B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9297 92.97%
Caco-2 - 0.8052 80.52%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.5857 58.57%
Subcellular localzation Mitochondria 0.6879 68.79%
OATP2B1 inhibitior + 0.5809 58.09%
OATP1B1 inhibitior + 0.8889 88.89%
OATP1B3 inhibitior + 0.9287 92.87%
MATE1 inhibitior - 0.7000 70.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.8229 82.29%
P-glycoprotein inhibitior + 0.6411 64.11%
P-glycoprotein substrate - 0.7367 73.67%
CYP3A4 substrate + 0.5554 55.54%
CYP2C9 substrate - 0.6039 60.39%
CYP2D6 substrate - 0.8389 83.89%
CYP3A4 inhibition - 0.6610 66.10%
CYP2C9 inhibition + 0.5541 55.41%
CYP2C19 inhibition + 0.6354 63.54%
CYP2D6 inhibition - 0.6885 68.85%
CYP1A2 inhibition + 0.8395 83.95%
CYP2C8 inhibition - 0.6089 60.89%
CYP inhibitory promiscuity - 0.5116 51.16%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7641 76.41%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.7260 72.60%
Skin irritation - 0.7138 71.38%
Skin corrosion - 0.9184 91.84%
Ames mutagenesis + 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3936 39.36%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.7431 74.31%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.8669 86.69%
Acute Oral Toxicity (c) III 0.5084 50.84%
Estrogen receptor binding + 0.8894 88.94%
Androgen receptor binding + 0.7603 76.03%
Thyroid receptor binding + 0.5473 54.73%
Glucocorticoid receptor binding + 0.8203 82.03%
Aromatase binding + 0.7056 70.56%
PPAR gamma + 0.8825 88.25%
Honey bee toxicity - 0.8279 82.79%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.6100 61.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.49% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 96.26% 94.73%
CHEMBL2581 P07339 Cathepsin D 95.28% 98.95%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 94.85% 89.34%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.02% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.15% 89.00%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 89.83% 92.08%
CHEMBL1951 P21397 Monoamine oxidase A 89.77% 91.49%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 89.32% 83.57%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.84% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.41% 99.23%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.79% 99.17%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.47% 94.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.69% 90.71%
CHEMBL1163101 O75460 Serine/threonine-protein kinase/endoribonuclease IRE1 81.40% 98.11%
CHEMBL3038469 P24941 CDK2/Cyclin A 81.16% 91.38%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.69% 86.33%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.12% 85.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cratoxylum cochinchinense

Cross-Links

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PubChem 11619632
NPASS NPC291923
LOTUS LTS0264755
wikiData Q27134117