[(1S,2S,3'S,4S,4'S,6S,7R,8R,9S,12S,13R,14R,16R)-3',16-dihydroxy-14-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-9,13-dimethyl-5'-methylidene-4'-[(2S,3R,4R,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-7-yl]methyl acetate

Details

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Internal ID 22806395-a713-4a27-a73e-d593d40fb2ba
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(1S,2S,3'S,4S,4'S,6S,7R,8R,9S,12S,13R,14R,16R)-3',16-dihydroxy-14-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-9,13-dimethyl-5'-methylidene-4'-[(2S,3R,4R,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-7-yl]methyl acetate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3CC(CC4=CCC5C(C34C)CCC6(C5CC7C6C(C8(O7)C(C(C(=C)CO8)OC9C(C(C(C(O9)C)O)O)O)O)COC(=O)C)C)O)CO)O)OC1C(C(C(CO1)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2O[C@@H]3C[C@@H](CC4=CC[C@@H]5[C@@H]([C@@]34C)CC[C@]6([C@H]5C[C@H]7[C@@H]6[C@@H]([C@]8(O7)[C@H]([C@H](C(=C)CO8)O[C@H]9[C@@H]([C@@H]([C@H]([C@H](O9)C)O)O)O)O)COC(=O)C)C)O)CO)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O)O)O)O)O
InChI InChI=1S/C52H80O25/c1-18-15-69-52(45(66)42(18)74-47-40(64)37(61)33(57)19(2)70-47)27(16-67-21(4)54)32-29(77-52)13-26-24-8-7-22-11-23(55)12-31(51(22,6)25(24)9-10-50(26,32)5)73-49-44(76-48-41(65)38(62)34(58)20(3)71-48)43(36(60)30(14-53)72-49)75-46-39(63)35(59)28(56)17-68-46/h7,19-20,23-49,53,55-66H,1,8-17H2,2-6H3/t19-,20+,23-,24-,25+,26+,27+,28-,29+,30-,31-,32+,33+,34+,35+,36-,37-,38-,39-,40-,41-,42+,43+,44-,45+,46+,47+,48+,49+,50+,51+,52+/m1/s1
InChI Key YRXCJWJLZOBZOM-WKTZVSFBSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C52H80O25
Molecular Weight 1105.20 g/mol
Exact Mass 1104.49886803 g/mol
Topological Polar Surface Area (TPSA) 382.00 Ų
XlogP -4.00
Atomic LogP (AlogP) -3.92
H-Bond Acceptor 25
H-Bond Donor 13
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(1S,2S,3'S,4S,4'S,6S,7R,8R,9S,12S,13R,14R,16R)-3',16-dihydroxy-14-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-9,13-dimethyl-5'-methylidene-4'-[(2S,3R,4R,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-7-yl]methyl acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8103 81.03%
Caco-2 - 0.8825 88.25%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7885 78.85%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8336 83.36%
OATP1B3 inhibitior + 0.8568 85.68%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.9132 91.32%
P-glycoprotein inhibitior + 0.7453 74.53%
P-glycoprotein substrate + 0.7257 72.57%
CYP3A4 substrate + 0.7655 76.55%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8766 87.66%
CYP3A4 inhibition - 0.8845 88.45%
CYP2C9 inhibition - 0.9065 90.65%
CYP2C19 inhibition - 0.9142 91.42%
CYP2D6 inhibition - 0.9374 93.74%
CYP1A2 inhibition - 0.9048 90.48%
CYP2C8 inhibition + 0.8157 81.57%
CYP inhibitory promiscuity - 0.9461 94.61%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5488 54.88%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9041 90.41%
Skin irritation + 0.5679 56.79%
Skin corrosion - 0.9381 93.81%
Ames mutagenesis - 0.7164 71.64%
Human Ether-a-go-go-Related Gene inhibition + 0.7701 77.01%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.7195 71.95%
skin sensitisation - 0.9109 91.09%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.7287 72.87%
Acute Oral Toxicity (c) III 0.4393 43.93%
Estrogen receptor binding + 0.8225 82.25%
Androgen receptor binding + 0.7492 74.92%
Thyroid receptor binding - 0.4885 48.85%
Glucocorticoid receptor binding + 0.7285 72.85%
Aromatase binding + 0.6030 60.30%
PPAR gamma + 0.8058 80.58%
Honey bee toxicity - 0.5587 55.87%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5545 55.45%
Fish aquatic toxicity + 0.9699 96.99%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.61% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.33% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 97.44% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.44% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.15% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.84% 89.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.81% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.19% 97.09%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 92.94% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.51% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.02% 96.61%
CHEMBL5255 O00206 Toll-like receptor 4 90.73% 92.50%
CHEMBL204 P00734 Thrombin 86.91% 96.01%
CHEMBL2243 O00519 Anandamide amidohydrolase 86.59% 97.53%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.49% 94.00%
CHEMBL340 P08684 Cytochrome P450 3A4 84.36% 91.19%
CHEMBL3401 O75469 Pregnane X receptor 83.08% 94.73%
CHEMBL1871 P10275 Androgen Receptor 82.68% 96.43%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.30% 96.77%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.10% 93.04%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.91% 96.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.51% 91.24%
CHEMBL5028 O14672 ADAM10 81.30% 97.50%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 81.01% 92.88%
CHEMBL2581 P07339 Cathepsin D 80.30% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clintonia udensis

Cross-Links

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PubChem 102026852
LOTUS LTS0038638
wikiData Q105353202