Clibadic acid

Details

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Internal ID 9e61a8bf-6f95-4779-983c-69837404bd6d
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > Acyclic diterpenoids
IUPAC Name (2Z,6Z,10Z)-12-acetyloxy-6-(acetyloxymethyl)-10-methyl-2-(4-methyl-3-methylidenepentyl)dodeca-2,6,10-trienoic acid
SMILES (Canonical) CC(C)C(=C)CCC(=CCCC(=CCCC(=CCOC(=O)C)C)COC(=O)C)C(=O)O
SMILES (Isomeric) CC(C)C(=C)CC/C(=C/CC/C(=C/CC/C(=C\COC(=O)C)/C)/COC(=O)C)/C(=O)O
InChI InChI=1S/C25H38O6/c1-18(2)20(4)13-14-24(25(28)29)12-8-11-23(17-31-22(6)27)10-7-9-19(3)15-16-30-21(5)26/h10,12,15,18H,4,7-9,11,13-14,16-17H2,1-3,5-6H3,(H,28,29)/b19-15-,23-10-,24-12-
InChI Key IRHJCFCBUBTOMP-ZVVWAPISSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H38O6
Molecular Weight 434.60 g/mol
Exact Mass 434.26683893 g/mol
Topological Polar Surface Area (TPSA) 89.90 Ų
XlogP 5.70
Atomic LogP (AlogP) 5.55
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 15

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Clibadic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9374 93.74%
Caco-2 - 0.5954 59.54%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7887 78.87%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8973 89.73%
OATP1B3 inhibitior + 0.9097 90.97%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.9385 93.85%
P-glycoprotein inhibitior + 0.7349 73.49%
P-glycoprotein substrate - 0.8202 82.02%
CYP3A4 substrate + 0.5492 54.92%
CYP2C9 substrate + 0.6243 62.43%
CYP2D6 substrate - 0.9188 91.88%
CYP3A4 inhibition - 0.7279 72.79%
CYP2C9 inhibition - 0.7360 73.60%
CYP2C19 inhibition - 0.8447 84.47%
CYP2D6 inhibition - 0.9080 90.80%
CYP1A2 inhibition - 0.8323 83.23%
CYP2C8 inhibition - 0.7912 79.12%
CYP inhibitory promiscuity - 0.9026 90.26%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.7023 70.23%
Carcinogenicity (trinary) Non-required 0.6615 66.15%
Eye corrosion - 0.7785 77.85%
Eye irritation - 0.8744 87.44%
Skin irritation + 0.5204 52.04%
Skin corrosion - 0.9846 98.46%
Ames mutagenesis - 0.5000 50.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear - 0.9600 96.00%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation + 0.4749 47.49%
Respiratory toxicity - 0.6333 63.33%
Reproductive toxicity - 0.8608 86.08%
Mitochondrial toxicity - 0.8625 86.25%
Nephrotoxicity + 0.6316 63.16%
Acute Oral Toxicity (c) IV 0.5661 56.61%
Estrogen receptor binding + 0.5275 52.75%
Androgen receptor binding - 0.5571 55.71%
Thyroid receptor binding - 0.5118 51.18%
Glucocorticoid receptor binding + 0.6886 68.86%
Aromatase binding + 0.6812 68.12%
PPAR gamma - 0.5718 57.18%
Honey bee toxicity - 0.8429 84.29%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7155 71.55%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.75% 96.09%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 90.82% 96.47%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.04% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 88.17% 94.73%
CHEMBL2581 P07339 Cathepsin D 86.41% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 86.24% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.87% 94.45%
CHEMBL340 P08684 Cytochrome P450 3A4 83.61% 91.19%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.50% 96.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.46% 96.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.15% 97.36%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.83% 97.21%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 80.52% 98.75%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.50% 95.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.40% 97.25%
CHEMBL1966 Q02127 Dihydroorotate dehydrogenase 80.12% 96.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clibadium eggersii

Cross-Links

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PubChem 163184455
LOTUS LTS0055252
wikiData Q105118846